Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

t(6;9)(p23;q34)

Identity

 
  t(6;9)(p23;q34) G- banding - Courtesy Diane H. Norback, Eric B. Johnson, Sara Morrison-Delap Cytogenetics at theWaisman Center (top and middle top), Jean-Luc Lai (middle below), and Roland Berger (below)

Clinics and Pathology

Disease ANLL and/or MDS
Phenotype / cell stem origin M2, M4 ANLL, often preceded by MDS;
M1 ANLL or RAEB at times;
may be secondary to toxic exposure;
a primitive myeloid progenitor is likely to be involved
Epidemiology 1% of ANLL;
found at any age, but median age (25-30 yrs) is less than usual in ANLL;
rare in the elderly;
sex ratio: 1M/1F;
blood data: marked basophilia (> 1% of nucleated cells) in one third to half of the patients
Cytology TdT +; Auer rods
 
The translocation t(6;9)(p23;q34) results in the formation of a chimeric fusion gene: DEK (6q23) and CAN (9q34). CAN is a putative oncogene which may be activated by fusion of its 3' end to other genes than DEK. One such recently reported gene is called SET and leads to expression of a SET/CAN fusion RNA. The t(6;9)(p21-22;q34) may be seen in either AML M2 or less frequently in M4 or MDS and acute myelofibrosis often in association with excessz basophils. The t(6;9) is reported mostly in young adults. The prognosis of patients carrying the t(6;9) is unfavorable - Courtesy Georges Flandrin, CD-ROM AML/MDS G.Flandrin/ICG. TRIBVN
Prognosis remission difficult to obtain; CR in only half cases; median survival around 1 yr

Cytogenetics

Cytogenetics Morphological may be over loocked
Additional anomalies most often none (80%); recurrent, although rare, additional anomalies are: +8, +13, +21
Variants three way complex t(6;9;Var) exist

Genes involved and Proteins

Gene Name DEK
Location 6p23
Protein contains acidic domains and a nuclear localisation signal;
DNA binding protein;
transcriptional regulation and signal transduction
Gene Name CAN
Location 9q34
Protein contains dimerization domains -> forms homodimers;
nuclear membrane localisation;
associated with the nuclear pore complex

Result of the chromosomal anomaly

Hybrid gene
Description 5' DEK - 3' CAN on der(6);
head to tail DEK/CAN fusion gene (SET/CAN exceptional);
breakpoint clusters in a single intron of 8 kb (ICB9: 'intron containing breakpoint 9') in CAN, and in a single intron (of 12 kb) as well (ICB6) in DEK
Transcript 5.5 kb RNA; no CAN-DEK reciprocal transcript on chromosome 9
Detection RNA-PCR
  
Fusion Protein
Description 165 kDa; N-term with almost the entire DEK protein fused to the C-terminal two-thirds of the CAN protein
Expression Localisation nuclear localisation
  

External links

Other databaset(6;9)(p23;q34) Mitelman database (CGAP - NCBI)
Other databaset(6;9)(p23;q34) CancerChromosomes (NCBI)

Bibliography

Increased numbers of marrow basophils may be associated with a t(6;9) in ANLL.
Pearson MG, Vardiman JW, Le Beau MM, Rowley JD, Schwartz S, Kerman SL, Cohen MM, Fleischman EW, Prigogina EL
American journal of hematology. 1985 ; 18 (4) : 393-403.
PMID 3976650
 
The (6;9) chromosome translocation, associated with a specific subtype of acute nonlymphocytic leukemia, leads to aberrant transcription of a target gene on 9q34.
von Lindern M, Poustka A, Lerach H, Grosveld G
Molecular and cellular biology. 1990 ; 10 (8) : 4016-4026.
PMID 2370860
 
Dek-can rearrangement in translocation (6;9)(p23;q34).
Soekarman D, von Lindern M, van der Plas DC, Selleri L, Bartram CR, Martiat P, Culligan D, Padua RA, Hasper-Voogt KP, Hagemeijer A
Leukemia : official journal of the Leukemia Society of America, Leukemia Research Fund, U.K. 1992 ; 6 (6) : 489-494.
PMID 1602786
 
Translocation t(6;9) in acute non-lymphocytic leukaemia results in the formation of a DEK-CAN fusion gene.
von Lindern M, Fornerod M, Soekarman N, van Baal S, Jaegle M, Hagemeijer A, Bootsma D, Grosveld G
Bailliere's clinical haematology. 1992 ; 5 (4) : 857-879.
PMID 1308167
 
Translocation t(6;9)(p23;q34) in acute myeloid leukemia without myelodysplasia or basophilia: two cases and a review of the literature.
Lillington DM, MacCallum PK, Lister TA, Gibbons B
Leukemia : official journal of the Leukemia Society of America, Leukemia Research Fund, U.K. 1993 ; 7 (4) : 527-531.
PMID 8464230
 
Interaction of cellular proteins with the leukemia specific fusion proteins DEK-CAN and SET-CAN and their normal counterpart, the nucleoporin CAN.
Fornerod M, Boer J, van Baal S, Morreau H, Grosveld G
Oncogene. 1996 ; 13 (8) : 1801-1808.
PMID 8895527
 

Contributor(s)

Written01-1998Jean-Loup Huret

Citation

This paper should be referenced as such :
Huret JL . t(6;9)(p23;q34). Atlas Genet Cytogenet Oncol Haematol. January 1998 .
URL : http://AtlasGeneticsOncology.org/Genes/t0609.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Sep 24 21:06:50 2008


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

j.l.huret@chu-poitiers.fr.