Chromosome 3

Atlas of Genetics and Cytogenetics in Oncology and Haematology

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ENTITIES: by Chromosome band

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Chromosome 3

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Band 3p23

chr3:30800000-32000000 (1200 Kb)

Chromosomal abnormalities in band 3p23

Genes in band 3p23 (reference hg38)

External links

References

Chromosomal abnormalities in band 3p23

(click on headers to reorder columns)

Band 1	Band 2	Class	Entity	Partner 1	Partner 2	Links	Topography	Morphology	[PubMed]	[Study]
		Mitelman	del(3)(p13p23)			Mitelman (CGAP)		Chronic myeloid leukemia, t(9;22)
		Mitelman	del(3)(p13p23)			Mitelman (CGAP)		Diffuse large B-cell lymphoma
		Mitelman	del(3)(p14p23)			Mitelman (CGAP)		Acute erythroleukemia (FAB type M6)
		Mitelman	del(3)(p14p23)			Mitelman (CGAP)	Kidney	Adenocarcinoma
		Mitelman	del(3)(p14p23)			Mitelman (CGAP)	Lung	Squamous cell carcinoma
		Mitelman	del(3)(p14p23)			Mitelman (CGAP)	Lung	Undifferentiated carcinoma, small cell
		Mitelman	del(3)(p14p23)			Mitelman (CGAP)	Pleura	Mesothelioma
		Mitelman	del(3)(p21p23)			Mitelman (CGAP)	Kidney	Adenocarcinoma
		Mitelman	del(3)(p21p23)			Mitelman (CGAP)		Mantle cell lymphoma
		Mitelman	del(3)(p21p23)			Mitelman (CGAP)	Pleura	Mesothelioma
3p23		Cosmic_SV	del(3)(p23)			Cosmic_SV [COST122338]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU328]
3p23		Cosmic_SV	del(3)(p23)			Cosmic_SV [COST124043]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU328]
3p23		Cosmic_SV	del(3)(p23)			Cosmic_SV [COST131067]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU328]
3p23		Cosmic_SV	del(3)(p23)			Cosmic_SV [COST153959]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p23		Cosmic_SV	del(3)(p23)			Cosmic_SV [COST156505]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p23		Cosmic_SV	del(3)(p23)			Cosmic_SV [COST157714]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p23		Cosmic_SV	del(3)(p23)			Cosmic_SV [COST157798]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p23		Cosmic_SV	del(3)(p23)			Cosmic_SV [COST157799]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p23		Cosmic_SV	del(3)(p23)			Cosmic_SV [COST191498]	prostate__NS	carcinoma__adenocarcinoma		[COSU538]
3p23		Cosmic_SV	del(3)(p23)			Cosmic_SV [COST27521]	central_nervous_system__brain	primitive_neuroectodermal_tumour-medulloblastoma__NS
3p23		Cosmic_SV	del(3)(p23)			Cosmic_SV [COST456900]	pancreas__NS	carcinoma__NS		[COSU382]
3p23		Cosmic_SV	del(3)(p23)			Cosmic_SV [COST460284]	liver__NS	carcinoma__NS		[COSU322]
		Mitelman	del(3)(p23)			Mitelman (CGAP)		Acute myeloblastic leukemia with maturation (FAB type M2)
		Mitelman	del(3)(p23)			Mitelman (CGAP)		Acute myeloblastic leukemia without maturation (FAB type M1)
		Mitelman	del(3)(p23)			Mitelman (CGAP)	Brain	Astrocytoma, grade III-IV/Glioblastoma
		Mitelman	del(3)(p23)			Mitelman (CGAP)	Breast	Adenocarcinoma
		Mitelman	del(3)(p23)			Mitelman (CGAP)		Chronic myeloid leukemia, t(9;22)
		Mitelman	del(3)(p23)			Mitelman (CGAP)		Diffuse large B-cell lymphoma
		Mitelman	del(3)(p23)			Mitelman (CGAP)	Intraabdominal	Neuroblastoma
		Mitelman	del(3)(p23)			Mitelman (CGAP)		Multiple myeloma
		Mitelman	del(3)(p23)			Mitelman (CGAP)	Ovary	Adenocarcinoma
		Mitelman	del(3)(p23)			Mitelman (CGAP)	Pleura	Mesothelioma
		Mitelman	del(3)(p23)			Mitelman (CGAP)		Splenic marginal zone B-cell lymphoma
		Mitelman	del(3)(p23)			Mitelman (CGAP)	Testis	Teratoma (mature and immature)
3p23	3p12	Cosmic_SV	del(3)(p23p12)			Cosmic_SV [COST444072]	liver__NS	carcinoma__NS		[COSU322]
3p23	3p12	Cosmic_SV	del(3)(p23p12)			Cosmic_SV [COST461987]	liver__NS	carcinoma__NS		[COSU322]
3p23	3p22	Cosmic_SV	del(3)(p23p22)			Cosmic_SV [COST25952]	breast__NS	carcinoma__ductal_carcinoma		[COSU385]
		Mitelman	del(3)(p23p25)			Mitelman (CGAP)		Acute lymphoblastic leukemia/lymphoblastic lymphoma
3p23	3q12	Cosmic_SV	del(3)(p23q12)			Cosmic_SV [COST135817]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p23	3q12	Cosmic_SV	del(3)(p23q12)			Cosmic_SV [COST144503]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p23	3q13	Cosmic_SV	del(3)(p23q13)			Cosmic_SV [COST558521]	skin__NS	carcinoma__NS		[COSU656]
3p23	3q22	Cosmic_SV	del(3)(p23q22)			Cosmic_SV [COST197236]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3q24	Cosmic_SV	del(3)(p23q24)			Cosmic_SV [COST195947]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3q25	Cosmic_SV	del(3)(p23q25)			Cosmic_SV [COST189105]	prostate__NS	carcinoma__adenocarcinoma		[COSU538]
3p23	3q26	Cosmic_SV	del(3)(p23q26)			Cosmic_SV [COST152147]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p23	3q26	Cosmic_SV	del(3)(p23q26)			Cosmic_SV [COST163303]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p24	3p23	Cosmic_SV	del(3)(p24p23)			Cosmic_SV [COST118643]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU328]
		Mitelman	der(19)t(3;19)(p23;q13)			Mitelman (CGAP)		B-cell lymphoma associated with hemophagocytic syndrome
3p23		Cosmic_SV	dup(3)(p23)			Cosmic_SV [COST172672]	adrenal_gland__adrenal_gland	adrenal_cortical_carcinoma__virilizing_syndrome_producing
3p23		Cosmic_SV	dup(3)(p23)			Cosmic_SV [COST17413]	breast__NS	carcinoma__ductal_carcinoma
3p23		Cosmic_SV	dup(3)(p23)			Cosmic_SV [COST196429]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23		Cosmic_SV	dup(3)(p23)			Cosmic_SV [COST198588]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23		Cosmic_SV	dup(3)(p23)			Cosmic_SV [COST217462]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU382]
3p23		Cosmic_SV	dup(3)(p23)			Cosmic_SV [COST351425]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU382]
3p23		Cosmic_SV	dup(3)(p23)			Cosmic_SV [COST456590]	liver__NS	carcinoma__NS		[COSU322]
3p23		Cosmic_SV	dup(3)(p23)			Cosmic_SV [COST468545]	liver__NS	carcinoma__NS		[COSU322]
3p23	3p22	Cosmic_SV	dup(3)(p23p22)			Cosmic_SV [COST136567]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p23	3p22	Cosmic_SV	dup(3)(p23p22)			Cosmic_SV [COST138345]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p23	3p23	Cosmic_SV	dup(3)(p23p23)			Cosmic_SV [COST125890]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU328]
3p23	3p23	Cosmic_SV	dup(3)(p23p23)			Cosmic_SV [COST136922]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p23	3p23	Cosmic_SV	dup(3)(p23p23)			Cosmic_SV [COST141296]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p23	3q12	Cosmic_SV	dup(3)(p23q12)			Cosmic_SV [COST144492]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p23	3q28	Cosmic_SV	dup(3)(p23q28)			Cosmic_SV [COST163257]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p13	3p23	Cosmic_SV	ins(3)(p13p23)			Cosmic_SV [COST188043]	prostate__NS	carcinoma__adenocarcinoma		[COSU538]
3p23		Cosmic_SV	ins(3)(p23)			Cosmic_SV [COST192076]	prostate__NS	carcinoma__adenocarcinoma		[COSU538]
3p23		Cosmic_SV	inv(3)(p23)			Cosmic_SV [COST216565]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU382]
3p23		Cosmic_SV	inv(3)(p23)			Cosmic_SV [COST224959]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU382]
3p23		Cosmic_SV	inv(3)(p23)			Cosmic_SV [COST372386]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU382]
3p23	3p14	Cosmic_SV	inv(3)(p23p14)			Cosmic_SV [COST178101]	breast__NS	carcinoma__ER-positive_carcinoma
3p23	3p23	Cosmic_SV	inv(3)(p23p23)			Cosmic_SV [COST132231]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU328]
3p23	3p23	Cosmic_SV	inv(3)(p23p23)			Cosmic_SV [COST142086]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p23	3p23	Cosmic_SV	inv(3)(p23p23)			Cosmic_SV [COST142087]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p23	3p23	Cosmic_SV	inv(3)(p23p23)			Cosmic_SV [COST165724]	ovary__NS	carcinoma__mixed_adenosquamous_carcinoma		[COSU585]
3p24	3p24	Cosmic_SV	inv(3)(p24p24)			Cosmic_SV [COST125104]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU328]
3p23	10q21	dbCRID	t(3;10)(p23;q21.2)	NM_001130103.1		10993			[PubMed]
		Mitelman	t(3;15)(p23;q15)			Mitelman (CGAP)	Soft tissue	Liposarcoma, myxoid/round cell
		Mitelman	t(3;19)(p23;q13)			Mitelman (CGAP)		B-cell lymphoma associated with hemophagocytic syndrome
3p22	3p23	Atlas - Solid Tumor	t(3;3)(p22;p23) DYNC1LI1/GADL1	DYNC1LI1	GADL1	TT_t0303p22p23ID105861	Nervous system: Central Nervous system		[Biblio]
3p22	3p23	Atlas - Solid Tumor	t(3;3)(p22;p23) GPD1L/STT3B	GPD1L	STT3B	TT_t0303p22p23ID105862	Urinary system: Bladder		[Biblio]
		Mitelman	t(3;8)(p23;q12)			Mitelman (CGAP)	Salivary gland	Adenoma
11p15	3p23	Cosmic_SV	u(11;3)(p15;p23)			Cosmic_SV [COST559618]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
11p15	3p23	Cosmic_SV	u(11;3)(p15;p23)			Cosmic_SV [COST581420]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
11p15	3p23	Cosmic_SV	u(11;3)(p15;p23)			Cosmic_SV [COST765466]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
11q21	3p23	Cosmic_SV	u(11;3)(q21;p23)			Cosmic_SV [COST127016]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU328]
12p11	3p23	Cosmic_SV	u(12;3)(p11;p23)			Cosmic_SV [COST372486]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU382]
13q14	3p23	Cosmic_SV	u(13;3)(q14;p23)			Cosmic_SV [COST561171]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
13q14	3p23	Cosmic_SV	u(13;3)(q14;p23)			Cosmic_SV [COST741091]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
13q14	3p23	Cosmic_SV	u(13;3)(q14;p23)			Cosmic_SV [COST771196]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
17p13	3p23	Cosmic_SV	u(17;3)(p13;p23)			Cosmic_SV [COST759815]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
18q21	3p23	Cosmic_SV	u(18;3)(q21;p23)			Cosmic_SV [COST579011]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
18q21	3p23	Cosmic_SV	u(18;3)(q21;p23)			Cosmic_SV [COST735713]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
19p13	3p23	Cosmic_SV	u(19;3)(p13;p23)			Cosmic_SV [COST766613]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
21q11	3p23	Cosmic_SV	u(21;3)(q11;p23)			Cosmic_SV [COST119523]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU328]
2p12	3p23	Cosmic_SV	u(2;3)(p12;p23)			Cosmic_SV [COST213713]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU382]
2p12	3p23	Cosmic_SV	u(2;3)(p12;p23)			Cosmic_SV [COST498025]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU382]
3p23	11p11	Cosmic_SV	u(3;11)(p23;p11)			Cosmic_SV [COST390688]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	11p14	Cosmic_SV	u(3;11)(p23;p14)			Cosmic_SV [COST124887]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU328]
3p23	11p15	Cosmic_SV	u(3;11)(p23;p15)			Cosmic_SV [COST553853]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	11p15	Cosmic_SV	u(3;11)(p23;p15)			Cosmic_SV [COST572649]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	11p15	Cosmic_SV	u(3;11)(p23;p15)			Cosmic_SV [COST750231]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	12p11	Cosmic_SV	u(3;12)(p23;p11)			Cosmic_SV [COST215993]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU382]
3p23	12p11	Cosmic_SV	u(3;12)(p23;p11)			Cosmic_SV [COST324567]	breast__NS	carcinoma__lobular_carcinoma		[COSU652]
3p23	12q21	Cosmic_SV	u(3;12)(p23;q21)			Cosmic_SV [COST129760]	pancreas__NS	carcinoma__ductal_carcinoma		[COSU328]
3p23	13p13	Cosmic_SV	u(3;13)(p23;p13)			Cosmic_SV [COST555411]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	13p13	Cosmic_SV	u(3;13)(p23;p13)			Cosmic_SV [COST558259]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	13p13	Cosmic_SV	u(3;13)(p23;p13)			Cosmic_SV [COST754591]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	13q14	Cosmic_SV	u(3;13)(p23;q14)			Cosmic_SV [COST571278]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	13q14	Cosmic_SV	u(3;13)(p23;q14)			Cosmic_SV [COST738173]	prostate__NS	carcinoma__adenocarcinoma		[COSU538]
3p23	13q14	Cosmic_SV	u(3;13)(p23;q14)			Cosmic_SV [COST739358]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	13q14	Cosmic_SV	u(3;13)(p23;q14)			Cosmic_SV [COST752843]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	17p11	Cosmic_SV	u(3;17)(p23;p11)			Cosmic_SV [COST367764]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	17p13	Cosmic_SV	u(3;17)(p23;p13)			Cosmic_SV [COST764913]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	18q21	Cosmic_SV	u(3;18)(p23;q21)			Cosmic_SV [COST569209]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	19p13	Cosmic_SV	u(3;19)(p23;p13)			Cosmic_SV [COST758141]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	6p24	Cosmic_SV	u(3;6)(p23;p24)			Cosmic_SV [COST339952]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	6q11	Cosmic_SV	u(3;6)(p23;q11)			Cosmic_SV [COST368354]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	8p11	Cosmic_SV	u(3;8)(p23;p11)			Cosmic_SV [COST357096]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	8p11	Cosmic_SV	u(3;8)(p23;p11)			Cosmic_SV [COST745032]	prostate__NS	carcinoma__adenocarcinoma		[COSU538]
3p23	8p12	Cosmic_SV	u(3;8)(p23;p12)			Cosmic_SV [COST367736]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	8p23	Cosmic_SV	u(3;8)(p23;p23)			Cosmic_SV [COST726286]	prostate__NS	carcinoma__adenocarcinoma		[COSU538]
3p23	3p12	Cosmic_SV	u(3)(p23;p12)			Cosmic_SV [COST375365]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	3p12	Cosmic_SV	u(3)(p23;p12)			Cosmic_SV [COST560559]	endometrium__NS	carcinoma__carcinosarcoma-malignant_mesodermal_mixed_tumour		[COSU677]
3p23	3p12	Cosmic_SV	u(3)(p23;p12)			Cosmic_SV [COST769870]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p13	Cosmic_SV	u(3)(p23;p13)			Cosmic_SV [COST369301]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	3p13	Cosmic_SV	u(3)(p23;p13)			Cosmic_SV [COST768465]	prostate__NS	carcinoma__adenocarcinoma		[COSU538]
3p23	3p14	Cosmic_SV	u(3)(p23;p14)			Cosmic_SV [COST387144]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	3p21	Cosmic_SV	u(3)(p23;p21)			Cosmic_SV [COST492291]	prostate__NS	carcinoma__adenocarcinoma		[COSU675]
3p23	3p22	Cosmic_SV	u(3)(p23;p22)			Cosmic_SV [COST449175]	breast__NS	carcinoma__HER-positive_carcinoma		[COSU668]
3p23	3p22	Cosmic_SV	u(3)(p23;p22)			Cosmic_SV [COST492686]	endometrium__NS	carcinoma__carcinosarcoma-malignant_mesodermal_mixed_tumour		[COSU677]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST316485]	breast__NS	carcinoma__metaplastic_carcinoma		[COSU652]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST318684]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST326964]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST331983]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST337689]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST342447]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST355862]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST390807]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST450080]	breast__NS	carcinoma__HER-positive_carcinoma		[COSU668]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST496249]	prostate__NS	carcinoma__adenocarcinoma		[COSU675]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST506557]	prostate__NS	carcinoma__adenocarcinoma		[COSU675]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST556784]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST559516]	endometrium__NS	carcinoma__carcinosarcoma-malignant_mesodermal_mixed_tumour		[COSU677]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST564846]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST566689]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST575441]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST729170]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST732027]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST737175]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST737176]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST745618]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST747252]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST752301]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST757296]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST760102]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST760731]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST765266]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p23	Cosmic_SV	u(3)(p23;p23)			Cosmic_SV [COST773188]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p26	Cosmic_SV	u(3)(p23;p26)			Cosmic_SV [COST331531]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	3p26	Cosmic_SV	u(3)(p23;p26)			Cosmic_SV [COST335206]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	3p26	Cosmic_SV	u(3)(p23;p26)			Cosmic_SV [COST335304]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	3p26	Cosmic_SV	u(3)(p23;p26)			Cosmic_SV [COST351554]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	3p26	Cosmic_SV	u(3)(p23;p26)			Cosmic_SV [COST360614]	breast__NS	carcinoma__HER-positive_carcinoma		[COSU652]
3p23	3p26	Cosmic_SV	u(3)(p23;p26)			Cosmic_SV [COST382098]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p23	3p26	Cosmic_SV	u(3)(p23;p26)			Cosmic_SV [COST442972]	breast__NS	carcinoma__HER-positive_carcinoma		[COSU668]
3p23	3p26	Cosmic_SV	u(3)(p23;p26)			Cosmic_SV [COST504665]	prostate__NS	carcinoma__adenocarcinoma		[COSU675]
3p23	3p26	Cosmic_SV	u(3)(p23;p26)			Cosmic_SV [COST720326]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p26	Cosmic_SV	u(3)(p23;p26)			Cosmic_SV [COST720785]	prostate__NS	carcinoma__adenocarcinoma		[COSU538]
3p23	3p26	Cosmic_SV	u(3)(p23;p26)			Cosmic_SV [COST735986]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p26	Cosmic_SV	u(3)(p23;p26)			Cosmic_SV [COST749645]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p26	Cosmic_SV	u(3)(p23;p26)			Cosmic_SV [COST759551]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3p26	Cosmic_SV	u(3)(p23;p26)			Cosmic_SV [COST761051]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3q12	Cosmic_SV	u(3)(p23;q12)			Cosmic_SV [COST496513]	prostate__NS	carcinoma__adenocarcinoma		[COSU675]
3p23	3q13	Cosmic_SV	u(3)(p23;q13)			Cosmic_SV [COST498537]	prostate__NS	carcinoma__adenocarcinoma		[COSU675]
3p23	3q13	Cosmic_SV	u(3)(p23;q13)			Cosmic_SV [COST558289]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3q13	Cosmic_SV	u(3)(p23;q13)			Cosmic_SV [COST570381]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3q13	Cosmic_SV	u(3)(p23;q13)			Cosmic_SV [COST576161]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3q13	Cosmic_SV	u(3)(p23;q13)			Cosmic_SV [COST581060]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3q25	Cosmic_SV	u(3)(p23;q25)			Cosmic_SV [COST560214]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3q25	Cosmic_SV	u(3)(p23;q25)			Cosmic_SV [COST722106]	prostate__NS	carcinoma__adenocarcinoma		[COSU537]
3p23	3q26	Cosmic_SV	u(3)(p23;q26)			Cosmic_SV [COST496491]	prostate__NS	carcinoma__adenocarcinoma		[COSU675]
3p23	3q29	Cosmic_SV	u(3)(p23;q29)			Cosmic_SV [COST500619]	prostate__NS	carcinoma__adenocarcinoma		[COSU675]
3p24	3p23	Cosmic_SV	u(3)(p24;p23)			Cosmic_SV [COST239667]	bone__NS	osteosarcoma__NS
3p24	3p23	Cosmic_SV	u(3)(p24;p23)			Cosmic_SV [COST320686]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p24	3p23	Cosmic_SV	u(3)(p24;p23)			Cosmic_SV [COST357231]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p24	3p23	Cosmic_SV	u(3)(p24;p23)			Cosmic_SV [COST404302]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]
3p24	3p23	Cosmic_SV	u(3)(p24;p23)			Cosmic_SV [COST494363]	prostate__NS	carcinoma__adenocarcinoma		[COSU675]
3p24	3p23	Cosmic_SV	u(3)(p24;p23)			Cosmic_SV [COST720928]	prostate__NS	carcinoma__adenocarcinoma		[COSU538]
3p24	3p23	Cosmic_SV	u(3)(p24;p23)			Cosmic_SV [COST731411]	prostate__NS	carcinoma__adenocarcinoma		[COSU538]
3p26	3p23	Cosmic_SV	u(3)(p26;p23)			Cosmic_SV [COST389116]	breast__NS	carcinoma__ductal_carcinoma		[COSU652]

Genes in band 3p23

(click on headers to reorder columns)

GoldenPath hg38	Band 1	Band 2	Class	Fusion	Partner 1	Partner 2	Links	Topography	Morphology	Pubmed	Omim	Accession
chr3:31161704-31161787 -	3p23		Gene [G]		MIR466						[Omim]	[Entrez]
chr3:31532501-31637622 +	3p23	19q13	Gene [AM]	KLK3/STT3B	STT3B	KLK3	[Cosmic]	[TCGA-PRAD]			[Omim]	[Entrez]
chr3:31532501-31637622 +	3p23		Gene [FM]	AC092421.1/STT3B	STT3B	AC092421.1	[Cosmic]			[PubMed]	[Omim]	[Entrez]
chr3:31532501-31637622 +	3p23		Gene [G]		STT3B		[Cosmic]				[Omim]	[Entrez]
chr3:31532501-31637622 +	3p23	3p22	Gene [GDB]	CLASP2/STT3B	STT3B	CLASP2	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31532501-31637622 +	3p23	3p22	Gene [GDB]	CMTM8/STT3B	STT3B	CMTM8	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31532501-31637622 +	3p23	3p25	Gene [GDB]	STT3B/EMC3	STT3B	EMC3	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31532501-31637622 +	3p23	3p14	Gene [GDB]	FHIT/STT3B	STT3B	FHIT	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31532501-31637622 +	3p23	3p23	Gene [GDB]	STT3B/ZNF860	STT3B	ZNF860	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31532501-31637622 +	3p23	3p22	Gene [M]	CLASP2/STT3B	STT3B	CLASP2	[Cosmic] [Mitelman]	Unknown site	Mesenchymal tumor, NOS	[PubMed]	[Omim]	[Entrez]
chr3:31532501-31637622 +	3p23	3p22	Gene [M]	CMTM8/STT3B	STT3B	CMTM8	[Cosmic] [Mitelman]	Prostate	Adenocarcinoma	[PubMed]	[Omim]	[Entrez]
chr3:31532501-31637622 +	3p23	3p14	Gene [M]	FHIT/STT3B	STT3B	FHIT	[Cosmic] [Mitelman]	Stomach	Adenocarcinoma	[PubMed]	[Omim]	[Entrez]
chr3:31532501-31637622 +	3p23	3p22	Gene [M]	GPD1L/STT3B	STT3B	GPD1L	[Cosmic] [Mitelman]	Bladder	Transitional cell carcinoma	[PubMed]	[Omim]	[Entrez]
chr3:31532501-31637622 +	3p23	3p22	Gene [TF]	GPD1L/STT3B	STT3B	GPD1L	[Cosmic] [TCGA]	[TCGA-BLCA]		[PubMed]	[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	14q24	Gene [CT]	OSBPL10/FOS	OSBPL10	FOS	[Cosmic] [ChiTaRS]				[Omim]	[GenBank]
chr3:31660825-31981850 -	3p23	12p13	Gene [CT]	OSBPL10/MRPL51	OSBPL10	MRPL51	[Cosmic] [ChiTaRS]				[Omim]	[GenBank]
chr3:31660825-31981850 -	3p23	2q31	Gene [CT]	OSBPL10/OLA1	OSBPL10	OLA1	[Cosmic] [ChiTaRS]				[Omim]	[GenBank]
chr3:31660825-31981850 -	3p23	17p13	Gene [CT]	TP53/OSBPL10	OSBPL10	TP53	[Cosmic] [ChiTaRS]				[Omim]	[GenBank]
chr3:31660825-31981850 -	3p23		Gene [G]		OSBPL10		[Cosmic]				[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	1p21	Gene [GDB]	OSBPL10/CNN3	OSBPL10	CNN3	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	14q24	Gene [GDB]	OSBPL10/FOS	OSBPL10	FOS	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	3p22	Gene [GDB]	OSBPL10/GPD1L	OSBPL10	GPD1L	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	12p13	Gene [GDB]	OSBPL10/MRPL51	OSBPL10	MRPL51	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	2q31	Gene [GDB]	OSBPL10/OLA1	OSBPL10	OLA1	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	3p24	Gene [GDB]	RARB/OSBPL10	OSBPL10	RARB	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	3q21	Gene [GDB]	SNX4/OSBPL10	OSBPL10	SNX4	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	17p13	Gene [GDB]	OSBPL10/STX8	OSBPL10	STX8	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	17p13	Gene [GDB]	TP53/OSBPL10	OSBPL10	TP53	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	3p22	Gene [GDB]	OSBPL10/UBP1	OSBPL10	UBP1	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	3p24	Gene [GDB]	ZCWPW2/OSBPL10	OSBPL10	ZCWPW2	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	3p21	Gene [GDB]	ZNF197/OSBPL10	OSBPL10	ZNF197	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	3p21	Gene [GDB]	ZNF660/OSBPL10	OSBPL10	ZNF660	[Cosmic] [FusionGDB]				[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	3p22	Gene [M]	OSBPL10/GPD1L	OSBPL10	GPD1L	[Cosmic] [Mitelman]	Bladder	Transitional cell carcinoma	[PubMed]	[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	3p24	Gene [M]	RARB/OSBPL10	OSBPL10	RARB	[Cosmic] [Mitelman]	Skin	Malignant melanoma	[PubMed]	[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	17p13	Gene [M]	OSBPL10/STX8	OSBPL10	STX8	[Cosmic] [Mitelman]	Uterus, corpus	Malignant epithelial tumor, special type	[PubMed]	[Omim]	[Entrez]
chr3:31660825-31981850 -	3p23	3p22	Gene [TF]	OSBPL10/GPD1L	OSBPL10	GPD1L	[Cosmic] [TCGA]	[TCGA-BLCA]		[PubMed]	[Omim]	[Entrez]
chr3:31704213-31721586 +	3p23		Gene [G]		OSBPL10-AS1						[Omim]	[Entrez]
chr3:31981774-31991736 +	3p23		Gene [G]		ZNF860		[Cosmic]				[Omim]	[Entrez]
chr3:31981774-31991736 +	3p23	3p23	Gene [GDB]	STT3B/ZNF860	ZNF860	STT3B	[Cosmic] [FusionGDB]				[Omim]	[Entrez]

[ Bold normal : A; Italic normal :G; Italic small : E ]

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 [previous] 3 3p 3q 3p26 3p25 3p24 3p23 3p22 3p21 3p14 3p13 3p12 3p11 3q11 3q12 3q13 3q21 3q22 3q23 3q24 3q25 3q26 3q27 3q28 3q29 [next]

External links

Mitelman Database [NCI] : Breakpoint 3p23

[ UCSC ][ enSembl ][ MapView - NCBI ][ 1000Genomes ][ EVS ][ CGWB ][ DGV ][ DBVar ][ OMIM ][ HapMap ][ DECIPHER ] [ ECARUCA ]
Gene Expression (MSigDB) in 3p23 [ HTC ] [ NCI ] [ INV ]

Global tables

Anomalies list (tabulated txt file)

Genes list (tabulated txt file)

Anomalies list - limited to abnormalities with gene fusions(tabulated txt file)

Genes list - limited to genes fusions (tabulated txt file)

list of gene fusions for each gene (with origins of the data)

list of gene fusions by origin (with topography and morphology)

The human genome used in these documents corresponds to the hg38 (Build GRCh38). A more precise informtion about assemby can be found at Human genome Overview.
The limits of cytogenetic bands correspond to data from UCSC : cytoBand.txt.gz

ISCN Abbreviated Terms and Symbols [NCI]

[A]Atlas - Annotated genes

[G]Atlas - Other Genes

[F] fishClones (hg38)

[M] Mitelman Database of Chromosome Aberrations and Gene Fusions in Cancer [ CGAP Jul 2019]
and "Mitelman Database of Chromosome Aberrations and Gene Fusions in Cancer" (2012). Mitelman F, Johansson B and Mertens F (Eds.)" [Sept 2016]

[N] Mitelman Database of Chromosome Aberrations (/number)

[COS] Catalogue Of Somatic Mutations In Cancer [v90]

[COF] Catalogue Of Somatic Mutations In Cancer : Gene Fusions [v90] [PubMed 2017]

[CSV] Catalogue Of Somatic Mutations In Cancer : Structural variations (extracted frorm CosmicStructExport.tsv) [v90]) [PubMed 2014]

[CEN] Cancer Gene Census [v90]

[TF] [PubMed 2014]TCGA Fusions (MDAndersson) TCGA Fusions (Jackson Lab) [PubMed 2014] (the fusions are limited to tiers 1 and 2)

[TIC] [PubMed 2007] TicDB

[H2] [PubMed 2006] ChimerDB_2.0

[H3] [PubMed 2010] [PubMed 2017] ChimerDB_3.0 [PubMed 2017]

[K] [PubMed 2011] dbCRID

[CT] [PubMed 2011] [PubMed 2012] [PubMed 2014] ChiTARS-2.1 [PubMed 2016] ChiTARS-3.1

[LAI] [PubMed 2015] Fusion transcript loci share many genomic Features with non-fusion loci. Lai et al. BMC Genomics 2015

[PM] Gene Fusions from Pubmed abstract mining

[L] [PubMed 2011] Fusion gene microarray reveals cancer type-specificity among fusion genes. Lovf M et al.Genes Chromosomes Cancer. 2011 May;50(5):348-57.

[S] [PubMed 21009] A universal assay for detection of oncogenic fusion transcripts by oligo microarray analysis. Skotheim RI, et al. Mol Cancer. 2009 Jan 19;8:5.

[V][PubMed 2012] ETV6 fusion genes in hematological malignancies: A review. De Braekeleer E. et al. Leuk Res. 2012 May 12.

[GT] [Pubmed 2015] Cell Lines (Genentech) Nature Biotech Suppl.Table8

[FC] [PubMed 2015] Fusion cancer (Beijing) (the fusions are limited to class A and B)

[NOR] [PubMed 2016] Babiceanu M et al. Recurrent chimeric fusion RNAs in non-cancer tissues and cells. Nucleic Acids Res. 2016 Feb 2 (Table S3)

[URK] [PubMed 2016] Urakami et al. Next generation sequencing approach for detecting 491 fusion genes from human cancer. Biomed Res. 2016;37(1):51-62.

[AM] [PubMed 2016] Global analysis of somatic structural genomic alterations and their impact on gene expression in diverse human cancersAlaei-Mahabadi B. et al.,Proc Natl Acad Sci U S A. 2016 Nov 16. pii: 201606220.

[FM] [PubMed 2018] Genomic hotspots but few recurrent fusion genes in breast cancer, Fimereli et al., Genes Chromosomes Cancer. (SupplTableS2.xls) 2018 Feb 13

[MA] [PubMed 2018] Pan-cancer genome and transcriptome analyses of1,699 paediatric leukaemias and solid tumours, Ma et al, Nature (March 2018) Table S3

[GAO] [PubMed 2018] Driver Fusions and Their Implications in the Development and Treatment of Human Cancers. Gao et al, Cell Reports (April 2018) Table S2

[MAY] [PubMed 2018] Development and Verification of an RNA Sequencing (RNA-Seq) Assay for the Detection of Gene Fusions in Tumor, Winters et al (July 2018) Table S7

[GDB] [PubMed 2019] Fusion gene annotation DataBase. Kim P t Zhou X. Nucleic Acids Res. 2019 Jan 8;47(D1):D994-D1004 [site FusionGDB]

[DDR][DDG] [PubMed 2019] Improved detection of gene fusions by applying statistical methods reveals oncogenic RNA cancer drivers, Dehghannasiri R et al, Proc Natl Acad Sci U S A. 2019 Jul 15. pii: 201900391. doi: 10.1073/pnas.1900391116

[DDR] TGCA novel recurrent fusions - Sup. Table 1

[DDG] GTEx (normal tissus) recurrent fusions - Sup. Table 1

Contributor(s)

Written may 2012 Philippe Dessen

Updated sept. 2019 Philippe Dessen and Jean-Loup Huret

Citation

This paper should be referenced as such :
Dessen P and Huret JL. Chromosomal band 3p23. Atlas Genet Cytogenet Oncol Haematol. July 2012.
URL : http://atlasgeneticsoncology.org/Bands/3p23.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : mer. sept. 25 13:55:33 CEST 2019

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Written	may 2012	Philippe Dessen

Updated	sept. 2019	Philippe Dessen and Jean-Loup Huret