Atlas of Genetics and Cytogenetics in Oncology and Haematology

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ADGRA1-AS1 (adhesion G protein-coupled receptor A1 antisense RNA 1)

Identity

Alias_namesGPR123-AS1
GPR123 antisense RNA 1
Other alias
HGNC (Hugo) ADGRA1-AS1
LocusID (NCBI) 100128127
Atlas_Id 77054
Location 10q26.3  [Link to chromosome band 10q26]
Location_base_pair Starts at 133085249 and ends at 133086697 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ADGRA1-AS1   49543
Cards
Entrez_Gene (NCBI)ADGRA1-AS1  100128127  adhesion G protein-coupled receptor A1 antisense RNA 1
AliasesGPR123-AS1
GeneCards (Weizmann)ADGRA1-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:133085249-133086697 [Contig_View]  ADGRA1-AS1 [Vega]
TCGA cBioPortalADGRA1-AS1
AceView (NCBI)ADGRA1-AS1
Genatlas (Paris)ADGRA1-AS1
WikiGenes100128127
SOURCE (Princeton)ADGRA1-AS1
Genetics Home Reference (NIH)ADGRA1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ADGRA1-AS1  -     chr10:133085249-133086697 -  10q26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADGRA1-AS1  -     10q26.3   [Description]    (hg19-Feb_2009)
GoldenPathADGRA1-AS1 - 10q26.3 [CytoView hg19]  ADGRA1-AS1 - 10q26.3 [CytoView hg38]
Mapping of homologs : NCBIADGRA1-AS1 [Mapview hg19]  ADGRA1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI917325 AK125451
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADGRA1-AS1
Cluster EST : UnigeneHs.694139 [ NCBI ]
CGAP (NCI)Hs.694139
Gene ExpressionADGRA1-AS1 [ NCBI-GEO ]   ADGRA1-AS1 [ EBI - ARRAY_EXPRESS ]   ADGRA1-AS1 [ SEEK ]   ADGRA1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ADGRA1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100128127
GTEX Portal (Tissue expression)ADGRA1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ADGRA1-AS1
DMDM Disease mutations100128127
Blocks (Seattle)ADGRA1-AS1
Protein Interaction databases
BioGRIDADGRA1-AS1
STRING (EMBL)ADGRA1-AS1
ZODIACADGRA1-AS1
Ontologies - Pathways
Huge Navigator ADGRA1-AS1 [HugePedia]
snp3D : Map Gene to Disease100128127
BioCentury BCIQADGRA1-AS1
ClinGenADGRA1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100128127
Clinical trialADGRA1-AS1
Miscellaneous
canSAR (ICR)ADGRA1-AS1 (select the gene name)
DataMed IndexADGRA1-AS1
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineADGRA1-AS1
EVEXADGRA1-AS1
GoPubMedADGRA1-AS1
iHOPADGRA1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:18:53 CEST 2019
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