ALKBH2 (alkB homolog 2, alpha-ketoglutarate dependent dioxygenase)

2012-12-01  

Identity

HGNC
LOCATION
12q24.11
LOCUSID
ALIAS
ABH2

Other Information

Locus ID:

NCBI: 121642
MIM: 610602
HGNC: 32487
Ensembl: ENSG00000189046

Variants:

dbSNP: 121642
ClinVar: 121642
TCGA: ENSG00000189046
COSMIC: ALKBH2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000189046ENST00000343075Q6NS38
ENSG00000189046ENST00000429722Q6NS38
ENSG00000189046ENST00000440112Q6NS38
ENSG00000189046ENST00000536242F5H5X2
ENSG00000189046ENST00000536358F5GZZ0
ENSG00000189046ENST00000543444S4R3T5
ENSG00000189046ENST00000619381Q6NS38

Expression (GTEx)

0
5
10
15
20
25

Pathways

PathwaySourceExternal ID
DNA RepairREACTOMER-HSA-73894
DNA Damage ReversalREACTOMER-HSA-73942
Reversal of alkylation damage by DNA dioxygenasesREACTOMER-HSA-73943
ALKBH2 mediated reversal of alkylation damageREACTOMER-HSA-112122

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
375085042023Individual Contributions of Amido Acid Residues Tyr122, Ile168, and Asp173 to the Activity and Substrate Specificity of Human DNA Dioxygenase ABH2.0
375085042023Individual Contributions of Amido Acid Residues Tyr122, Ile168, and Asp173 to the Activity and Substrate Specificity of Human DNA Dioxygenase ABH2.0
359569102022Conformational Dynamics of Human ALKBH2 Dioxygenase in the Course of DNA Repair as Revealed by Stopped-Flow Fluorescence Spectroscopy.2
359569102022Conformational Dynamics of Human ALKBH2 Dioxygenase in the Course of DNA Repair as Revealed by Stopped-Flow Fluorescence Spectroscopy.2
331613732020Insights into the Direct Oxidative Repair of Etheno Lesions: MD and QM/MM Study on the Substrate Scope of ALKBH2 and AlkB.5
333029592020ALKBH2 inhibition alleviates malignancy in colorectal cancer by regulating BMI1-mediated activation of NF-κB pathway.6
331613732020Insights into the Direct Oxidative Repair of Etheno Lesions: MD and QM/MM Study on the Substrate Scope of ALKBH2 and AlkB.5
333029592020ALKBH2 inhibition alleviates malignancy in colorectal cancer by regulating BMI1-mediated activation of NF-κB pathway.6
311148942019DNA repair enzymes ALKBH2, ALKBH3, and AlkB oxidize 5-methylcytosine to 5-hydroxymethylcytosine, 5-formylcytosine and 5-carboxylcytosine in vitro.30
311148942019DNA repair enzymes ALKBH2, ALKBH3, and AlkB oxidize 5-methylcytosine to 5-hydroxymethylcytosine, 5-formylcytosine and 5-carboxylcytosine in vitro.30
269305152016Roles of Aag, Alkbh2, and Alkbh3 in the Repair of Carboxymethylated and Ethylated Thymidine Lesions.12
269305152016Roles of Aag, Alkbh2, and Alkbh3 in the Repair of Carboxymethylated and Ethylated Thymidine Lesions.12
257976012015Differential repair of etheno-DNA adducts by bacterial and human AlkB proteins.21
264088252015The interaction between ALKBH2 DNA repair enzyme and PCNA is direct, mediated by the hydrophobic pocket of PCNA and perturbed in naturally-occurring ALKBH2 variants.17
257976012015Differential repair of etheno-DNA adducts by bacterial and human AlkB proteins.21

Citation

Dessen P

ALKBH2 (alkB homolog 2, alpha-ketoglutarate dependent dioxygenase)

Atlas Genet Cytogenet Oncol Haematol. 2012-12-01

Online version: http://atlasgeneticsoncology.org/gene/53082/alkbh2