ANKFN1 (ankyrin repeat and fibronectin type III domain containing 1)

2014-11-01 Affiliation

Identity

HGNC

ANKFN1

LOCATION

17q22

LOCUSID

162282

ALIAS

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 162282
HGNC: 26766
Ensembl: ENSG00000153930

Variants:

dbSNP: 162282
ClinVar: 162282
TCGA: ENSG00000153930
COSMIC: ANKFN1

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000153930	ENST00000318698	Q8N957
ENSG00000153930	ENST00000566473	H3BM45
ENSG00000153930	ENST00000572945	I3L0N6
ENSG00000153930	ENST00000635860	A0A1B0GTR8
ENSG00000153930	ENST00000653862	A0A590UK59

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Protein levels (Protein atlas)

Not detected

Low

Medium

High

PharmGKB

Entity ID	Name	Type	Evidence	Association	PK	PD	PMIDs
PA447288	Essential hypertension	Disease	ClinicalAnnotation	associated		PD
PA449899	hydrochlorothiazide	Chemical	ClinicalAnnotation	associated		PD

References

Pubmed ID	Year	Title	Citations
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	62
28005267	2017	Human gingiva transcriptome during wound healing.	6

Citation

Dessen P

ANKFN1 (ankyrin repeat and fibronectin type III domain containing 1)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/60302/ankfn1