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ARHGEF10L (Rho guanine nucleotide exchange factor 10 like)

Identity

Alias (NCBI)GrinchGEF
HGNC (Hugo) ARHGEF10L
HGNC Alias symbFLJ10521
KIAA1626
HGNC Alias nameGrinchGEF
HGNC Previous nameRho guanine nucleotide exchange factor (GEF) 10-like
LocusID (NCBI) 55160
Atlas_Id 40584
Location 1p36.13  [Link to chromosome band 1p36]
Location_base_pair Starts at 17539698 and ends at 17697869 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ARHGEF10L (1p36.13) / CSDE1 (1p13.2)ARHGEF10L (1p36.13) / LGALS4 (19q13.2)ARHGEF10L (1p36.13) / PADI4 (1p36.13)
ARHGEF10L (1p36.13) / ZNF595 (4p16.3)CTNND1 (11q12.1) / ARHGEF10L (1p36.13)IGFBP5 (2q35) / ARHGEF10L (1p36.13)
IGSF9B (11q25) / ARHGEF10L (1p36.13)LGALS4 (19q13.2) / ARHGEF10L (1p36.13)MYD88 (3p22.2) / ARHGEF10L (1p36.13)
MYH10 (17p13.1) / ARHGEF10L (1p36.13)ARHGEF10L 1p36.13 / CSDE1 1p13.2ARHGEF10L 1p36.13 / PADI4 1p36.13

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)ARHGEF10L   25540
Cards
Entrez_Gene (NCBI)ARHGEF10L    Rho guanine nucleotide exchange factor 10 like
AliasesGrinchGEF
GeneCards (Weizmann)ARHGEF10L
Ensembl hg19 (Hinxton)ENSG00000074964 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000074964 [Gene_View]  ENSG00000074964 [Sequence]  chr1:17539698-17697869 [Contig_View]  ARHGEF10L [Vega]
ICGC DataPortalENSG00000074964
TCGA cBioPortalARHGEF10L
AceView (NCBI)ARHGEF10L
Genatlas (Paris)ARHGEF10L
SOURCE (Princeton)ARHGEF10L
Genetics Home Reference (NIH)ARHGEF10L
Genomic and cartography
GoldenPath hg38 (UCSC)ARHGEF10L  -     chr1:17539698-17697869 +  1p36.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARHGEF10L  -     1p36.13   [Description]    (hg19-Feb_2009)
GoldenPathARHGEF10L - 1p36.13 [CytoView hg19]  ARHGEF10L - 1p36.13 [CytoView hg38]
ImmunoBaseENSG00000074964
genome Data Viewer NCBIARHGEF10L [Mapview hg19]  
OMIM612494   
Gene and transcription
Genbank (Entrez)AB046846 AK001383 AK092020 AK123471 AK126877
RefSeq transcript (Entrez)NM_001011722 NM_001319837 NM_001319838 NM_001328124 NM_018125
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ARHGEF10L
Alternative Splicing GalleryENSG00000074964
Gene ExpressionARHGEF10L [ NCBI-GEO ]   ARHGEF10L [ EBI - ARRAY_EXPRESS ]   ARHGEF10L [ SEEK ]   ARHGEF10L [ MEM ]
Gene Expression Viewer (FireBrowse)ARHGEF10L [ Firebrowse - Broad ]
GenevisibleExpression of ARHGEF10L in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55160
GTEX Portal (Tissue expression)ARHGEF10L
Human Protein AtlasENSG00000074964-ARHGEF10L [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ARHGEF10L
Blocks (Seattle)ARHGEF10L
Human Protein Atlas [tissue]ENSG00000074964-ARHGEF10L [tissue]
HPRD07679
IPIIPI00513819   IPI00478817   IPI00896497   IPI00168137   IPI00896467   IPI01009882   IPI00910632   IPI00642727   
Protein Interaction databases
BioGRIDARHGEF10L
STRING (EMBL)ARHGEF10L
ZODIACARHGEF10L
Ontologies - Pathways
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXARHGEF10L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 25 19:11:32 CET 2021

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