Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ARHGEF7-AS1 (ARHGEF7 antisense RNA 1)

Identity

Alias (NCBI)-
HGNC (Hugo) ARHGEF7-AS1
HGNC Previous nameARHGEF7 antisense RNA 1 (non-protein coding)
LocusID (NCBI) 100874226
Atlas_Id 60482
Location 13q34  [Link to chromosome band 13q34]
Location_base_pair Starts at 111144305 and ends at 111148565 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ARHGEF7-AS1   39816
Cards
Entrez_Gene (NCBI)ARHGEF7-AS1  100874226  ARHGEF7 antisense RNA 1
Aliases
GeneCards (Weizmann)ARHGEF7-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr13:111144305-111148565 [Contig_View]  ARHGEF7-AS1 [Vega]
TCGA cBioPortalARHGEF7-AS1
AceView (NCBI)ARHGEF7-AS1
Genatlas (Paris)ARHGEF7-AS1
WikiGenes100874226
SOURCE (Princeton)ARHGEF7-AS1
Genetics Home Reference (NIH)ARHGEF7-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ARHGEF7-AS1  -     chr13:111144305-111148565 -  13q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ARHGEF7-AS1  -     13q34   [Description]    (hg19-Feb_2009)
GoldenPathARHGEF7-AS1 - 13q34 [CytoView hg19]  ARHGEF7-AS1 - 13q34 [CytoView hg38]
genome Data Viewer NCBIARHGEF7-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)DB508209
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ARHGEF7-AS1
Gene ExpressionARHGEF7-AS1 [ NCBI-GEO ]   ARHGEF7-AS1 [ EBI - ARRAY_EXPRESS ]   ARHGEF7-AS1 [ SEEK ]   ARHGEF7-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ARHGEF7-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of ARHGEF7-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100874226
GTEX Portal (Tissue expression)ARHGEF7-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ARHGEF7-AS1
DMDM Disease mutations100874226
Blocks (Seattle)ARHGEF7-AS1
Protein Interaction databases
BioGRIDARHGEF7-AS1
STRING (EMBL)ARHGEF7-AS1
ZODIACARHGEF7-AS1
Ontologies - Pathways
Huge Navigator ARHGEF7-AS1 [HugePedia]
snp3D : Map Gene to Disease100874226
BioCentury BCIQARHGEF7-AS1
ClinGenARHGEF7-AS1
Clinical trials, drugs, therapy
Protein Interactions : CTD100874226
Clinical trialARHGEF7-AS1
Miscellaneous
canSAR (ICR)ARHGEF7-AS1 (select the gene name)
HarmonizomeARHGEF7-AS1
DataMed IndexARHGEF7-AS1
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineARHGEF7-AS1
EVEXARHGEF7-AS1
GoPubMedARHGEF7-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 15:47:59 CEST 2020

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