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ART4 (ADP-ribosyltransferase 4 (Dombrock blood group))

Identity

Alias_namesDO
Dombrock blood group
ADP-ribosyltransferase 4 (DO blood group)
ADP-ribosyltransferase 4
Alias_symbol (synonym)DOK1
CD297
Other aliasARTC4
DO/ART4
HGNC (Hugo) ART4
LocusID (NCBI) 420
Atlas_Id 60541
Location 12p12.3  [Link to chromosome band 12p12]
Location_base_pair Starts at 14829311 and ends at 14843479 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ART4 (12p12.3) / SMCO3 (12p12.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ART4   726
LRG (Locus Reference Genomic)LRG_807
Cards
Entrez_Gene (NCBI)ART4  420  ADP-ribosyltransferase 4 (Dombrock blood group)
AliasesARTC4; CD297; DO; DO/ART4; 
DOK1
GeneCards (Weizmann)ART4
Ensembl hg19 (Hinxton)ENSG00000111339 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000111339 [Gene_View]  ENSG00000111339 [Sequence]  chr12:14829311-14843479 [Contig_View]  ART4 [Vega]
ICGC DataPortalENSG00000111339
TCGA cBioPortalART4
AceView (NCBI)ART4
Genatlas (Paris)ART4
WikiGenes420
SOURCE (Princeton)ART4
Genetics Home Reference (NIH)ART4
Genomic and cartography
GoldenPath hg38 (UCSC)ART4  -     chr12:14829311-14843479 -  12p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ART4  -     12p12.3   [Description]    (hg19-Feb_2009)
GoldenPathART4 - 12p12.3 [CytoView hg19]  ART4 - 12p12.3 [CytoView hg38]
ImmunoBaseENSG00000111339
Mapping of homologs : NCBIART4 [Mapview hg19]  ART4 [Mapview hg38]
OMIM110600   616060   
Gene and transcription
Genbank (Entrez)AF290204 AI149009 AK074308 AK291662 AY690666
RefSeq transcript (Entrez)NM_001354646 NM_021071
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ART4
Cluster EST : UnigeneHs.668803 [ NCBI ]
CGAP (NCI)Hs.668803
Alternative Splicing GalleryENSG00000111339
Gene ExpressionART4 [ NCBI-GEO ]   ART4 [ EBI - ARRAY_EXPRESS ]   ART4 [ SEEK ]   ART4 [ MEM ]
Gene Expression Viewer (FireBrowse)ART4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)420
GTEX Portal (Tissue expression)ART4
Human Protein AtlasENSG00000111339-ART4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ93070   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ93070  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ93070
Splice isoforms : SwissVarQ93070
Catalytic activity : Enzyme2.4.2.31 [ Enzyme-Expasy ]   2.4.2.312.4.2.31 [ IntEnz-EBI ]   2.4.2.31 [ BRENDA ]   2.4.2.31 [ KEGG ]   
PhosPhoSitePlusQ93070
Domaine pattern : Prosite (Expaxy)ART (PS01291)   
Domains : Interpro (EBI)ART   
Domain families : Pfam (Sanger)ART (PF01129)   
Domain families : Pfam (NCBI)pfam01129   
Conserved Domain (NCBI)ART4
DMDM Disease mutations420
Blocks (Seattle)ART4
SuperfamilyQ93070
Human Protein Atlas [tissue]ENSG00000111339-ART4 [tissue]
Peptide AtlasQ93070
HPRD04364
IPIIPI00004065   IPI00816545   IPI00816126   IPI00816789   IPI00939614   
Protein Interaction databases
DIP (DOE-UCLA)Q93070
IntAct (EBI)Q93070
FunCoupENSG00000111339
BioGRIDART4
STRING (EMBL)ART4
ZODIACART4
Ontologies - Pathways
QuickGOQ93070
Ontology : AmiGONAD+ ADP-ribosyltransferase activity  NAD(P)+-protein-arginine ADP-ribosyltransferase activity  extracellular region  plasma membrane  protein ADP-ribosylation  protein ADP-ribosylation  arginine metabolic process  membrane  peptidyl-arginine ADP-ribosylation  anchored component of membrane  
Ontology : EGO-EBINAD+ ADP-ribosyltransferase activity  NAD(P)+-protein-arginine ADP-ribosyltransferase activity  extracellular region  plasma membrane  protein ADP-ribosylation  protein ADP-ribosylation  arginine metabolic process  membrane  peptidyl-arginine ADP-ribosylation  anchored component of membrane  
NDEx NetworkART4
Atlas of Cancer Signalling NetworkART4
Wikipedia pathwaysART4
Orthology - Evolution
OrthoDB420
GeneTree (enSembl)ENSG00000111339
Phylogenetic Trees/Animal Genes : TreeFamART4
HOGENOMQ93070
Homologs : HomoloGeneART4
Homology/Alignments : Family Browser (UCSC)ART4
Gene fusions - Rearrangements
Fusion : QuiverART4
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerART4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ART4
dbVarART4
ClinVarART4
1000_GenomesART4 
Exome Variant ServerART4
ExAC (Exome Aggregation Consortium)ENSG00000111339
GNOMAD BrowserENSG00000111339
Varsome BrowserART4
Genetic variants : HAPMAP420
Genomic Variants (DGV)ART4 [DGVbeta]
DECIPHERART4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisART4 
Mutations
ICGC Data PortalART4 
TCGA Data PortalART4 
Broad Tumor PortalART4
OASIS PortalART4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICART4  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DART4
Mutations and Diseases : HGMDART4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ART4
DgiDB (Drug Gene Interaction Database)ART4
DoCM (Curated mutations)ART4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ART4 (select a term)
intoGenART4
Cancer3DART4(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM110600    616060   
Orphanet
DisGeNETART4
MedgenART4
Genetic Testing Registry ART4
NextProtQ93070 [Medical]
TSGene420
GENETestsART4
Target ValidationART4
Huge Navigator ART4 [HugePedia]
snp3D : Map Gene to Disease420
BioCentury BCIQART4
ClinGenART4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD420
Chemical/Pharm GKB GenePA142672580
Clinical trialART4
Miscellaneous
canSAR (ICR)ART4 (select the gene name)
DataMed IndexART4
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineART4
EVEXART4
GoPubMedART4
iHOPART4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:20:00 CEST 2019

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