| Nomenclature |
HGNC (Hugo) | ATF6B 2349 |
| Cards |
Entrez_Gene (NCBI) | ATF6B 1388 activating transcription factor 6 beta |
Aliases | CREB-RP; CREBL1; G13 |
GeneCards (Weizmann) | ATF6B |
Ensembl hg19 (Hinxton) | ENSG00000213676 [Gene_View] |
Ensembl hg38 (Hinxton) | ENSG00000213676 [Gene_View]  ENSG00000213676 [Sequence] chr6:32115268-32128240 [Contig_View] ATF6B [Vega] |
ICGC DataPortal | ENSG00000213676 |
TCGA cBioPortal | ATF6B |
AceView (NCBI) | ATF6B |
Genatlas (Paris) | ATF6B |
WikiGenes | 1388 |
SOURCE (Princeton) | ATF6B |
Genetics Home Reference (NIH) | ATF6B |
| Genomic and cartography |
GoldenPath hg38 (UCSC) | ATF6B - chr6:32115268-32128240 - 6p21.32 [Description] (hg38-Dec_2013) |
GoldenPath hg19 (UCSC) | ATF6B - 6p21.32 [Description] (hg19-Feb_2009) |
GoldenPath | ATF6B - 6p21.32 [CytoView hg19] ATF6B - 6p21.32 [CytoView hg38] |
ImmunoBase | ENSG00000213676 |
Mapping of homologs : NCBI | ATF6B [Mapview hg19] ATF6B [Mapview hg38] |
OMIM | 600984 |
| Gene and transcription |
Genbank (Entrez) | AK000928 BC008394 BC077075 BT007042 U31903 |
RefSeq transcript (Entrez) | NM_001136153 NM_004381 |
RefSeq genomic (Entrez) | NC_000006 NG_033940 NT_113891 NT_167245 NT_167247 |
Consensus coding sequences : CCDS (NCBI) | ATF6B |
Cluster EST : Unigene | Hs.42853 [ NCBI ] |
CGAP (NCI) | Hs.42853 |
Alternative Splicing Gallery | ENSG00000213676 |
Gene Expression | ATF6B [ NCBI-GEO ] ATF6B [ EBI - ARRAY_EXPRESS ]
ATF6B [ SEEK ] ATF6B [ MEM ] |
Gene Expression Viewer (FireBrowse) | ATF6B [ Firebrowse - Broad ] |
SOURCE (Princeton) | Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60] |
Genevestigator | Expression in : [tissues]  [cell-lines]  [cancer]  [perturbations]   |
BioGPS (Tissue expression) | 1388 |
GTEX Portal (Tissue expression) | ATF6B |
Human Protein Atlas | ENSG00000213676-ATF6B [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
UniProt/SwissProt | Q99941 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
NextProt | Q99941 [Sequence] [Exons] [Medical] [Publications] |
With graphics : InterPro | Q99941 |
Splice isoforms : SwissVar | Q99941 |
PhosPhoSitePlus | Q99941 |
Domaine pattern : Prosite (Expaxy) | BZIP (PS50217) BZIP_BASIC (PS00036) |
Domains : Interpro (EBI) | ATF6B bZIP |
Domain families : Pfam (Sanger) | bZIP_1 (PF00170) |
Domain families : Pfam (NCBI) | pfam00170 |
Domain families : Smart (EMBL) | BRLZ (SM00338) |
Conserved Domain (NCBI) | ATF6B |
DMDM Disease mutations | 1388 |
Blocks (Seattle) | ATF6B |
Superfamily | Q99941 |
Human Protein Atlas [tissue] | ENSG00000213676-ATF6B [tissue] |
Peptide Atlas | Q99941 |
HPRD | 02992 |
IPI | IPI00004084 IPI00221087 IPI00514304 IPI00791919 IPI00847851 |
| Protein Interaction databases |
DIP (DOE-UCLA) | Q99941 |
IntAct (EBI) | Q99941 |
FunCoup | ENSG00000213676 |
BioGRID | ATF6B |
STRING (EMBL) | ATF6B |
ZODIAC | ATF6B |
| Ontologies - Pathways |
QuickGO | Q99941 |
Ontology : AmiGO | RNA polymerase II distal enhancer sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription factor activity protein binding nucleus nucleolus endoplasmic reticulum membrane Golgi apparatus transcription, DNA-templated signal transduction integral component of endoplasmic reticulum membrane integral component of endoplasmic reticulum membrane protein-DNA complex cAMP response element binding ATF6-mediated unfolded protein response transcription regulatory region DNA binding positive regulation of transcription by RNA polymerase II RNA polymerase II transcription factor complex negative regulation of ATF6-mediated unfolded protein response positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress |
Ontology : EGO-EBI | RNA polymerase II distal enhancer sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription factor activity protein binding nucleus nucleolus endoplasmic reticulum membrane Golgi apparatus transcription, DNA-templated signal transduction integral component of endoplasmic reticulum membrane integral component of endoplasmic reticulum membrane protein-DNA complex cAMP response element binding ATF6-mediated unfolded protein response transcription regulatory region DNA binding positive regulation of transcription by RNA polymerase II RNA polymerase II transcription factor complex negative regulation of ATF6-mediated unfolded protein response positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress |
NDEx Network | ATF6B |
Atlas of Cancer Signalling Network | ATF6B |
Wikipedia pathways | ATF6B |
| Orthology - Evolution |
OrthoDB | 1388 |
GeneTree (enSembl) | ENSG00000213676 |
Phylogenetic Trees/Animal Genes : TreeFam | ATF6B |
HOGENOM | Q99941 |
Homologs : HomoloGene | ATF6B |
Homology/Alignments : Family Browser (UCSC) | ATF6B |
| Gene fusions - Rearrangements |
Fusion : Quiver | ATF6B |
| Polymorphisms : SNP and Copy number variants |
NCBI Variation Viewer | ATF6B [hg38] |
dbSNP Single Nucleotide Polymorphism (NCBI) | ATF6B |
dbVar | ATF6B |
ClinVar | ATF6B |
1000_Genomes | ATF6B |
Exome Variant Server | ATF6B |
ExAC (Exome Aggregation Consortium) | ENSG00000213676 |
GNOMAD Browser | ENSG00000213676 |
Varsome Browser | ATF6B |
Genetic variants : HAPMAP | 1388 |
Genomic Variants (DGV) | ATF6B [DGVbeta] |
DECIPHER | ATF6B [patients] [syndromes] [variants] [genes] |
CONAN: Copy Number Analysis | ATF6B |
| Mutations |
ICGC Data Portal | ATF6B |
TCGA Data Portal | ATF6B |
Broad Tumor Portal | ATF6B |
OASIS Portal | ATF6B [ Somatic mutations - Copy number] |
Somatic Mutations in Cancer : COSMIC | ATF6B [overview] [genome browser] [tissue] [distribution] |
Somatic Mutations in Cancer : COSMIC3D | ATF6B |
Mutations and Diseases : HGMD | ATF6B |
LOVD (Leiden Open Variation Database) | Whole genome datasets |
LOVD (Leiden Open Variation Database) | LOVD - Leiden Open Variation Database |
LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
BioMuta | search ATF6B |
DgiDB (Drug Gene Interaction Database) | ATF6B |
DoCM (Curated mutations) | ATF6B (select the gene name) |
CIViC (Clinical Interpretations of Variants in Cancer) | ATF6B (select a term) |
intoGen | ATF6B |
Cancer3D | ATF6B(select the gene name) |
Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
---|
OMIM | 600984 |
Orphanet | |
DisGeNET | ATF6B |
Medgen | ATF6B |
Genetic Testing Registry | ATF6B
|
NextProt | Q99941 [Medical] |
TSGene | 1388 |
GENETests | ATF6B |
Target Validation | ATF6B |
Huge Navigator |
ATF6B [HugePedia] |
snp3D : Map Gene to Disease | 1388 |
BioCentury BCIQ | ATF6B |
ClinGen | ATF6B |
| Clinical trials, drugs, therapy |
---|
Chemical/Protein Interactions : CTD | 1388 |
Chemical/Pharm GKB Gene | PA164716250 |
Clinical trial | ATF6B |
| Miscellaneous |
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canSAR (ICR) | ATF6B (select the gene name) |
DataMed Index | ATF6B |
| Probes |
---|
| Litterature |
---|
PubMed | 32 Pubmed reference(s) in Entrez |
GeneRIFs | Gene References Into Functions (Entrez) |
CoreMine | ATF6B |
EVEX | ATF6B |
GoPubMed | ATF6B |
iHOP | ATF6B |