B4GALT4 (beta-1,4-galactosyltransferase 4)

2018-02-01 Affiliation

Identity

HGNC

B4GALT4

LOCATION

3q13.32

LOCUSID

8702

ALIAS

B4Gal-T4,beta4Gal-T4

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 8702
MIM: 604015
HGNC: 927
Ensembl: ENSG00000121578

Variants:

dbSNP: 8702
ClinVar: 8702
TCGA: ENSG00000121578
COSMIC: B4GALT4

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000121578	ENST00000359213	O60513
ENSG00000121578	ENST00000359213	B2RAZ5
ENSG00000121578	ENST00000393765	O60513
ENSG00000121578	ENST00000393765	B2RAZ5
ENSG00000121578	ENST00000467604	C9J3R8
ENSG00000121578	ENST00000470111	C9JE00
ENSG00000121578	ENST00000471675	C9JA31
ENSG00000121578	ENST00000473887	C9JY38
ENSG00000121578	ENST00000475803	C9J4S5
ENSG00000121578	ENST00000479150	C9J5S0
ENSG00000121578	ENST00000480814	E7ETS9
ENSG00000121578	ENST00000483209	O60513
ENSG00000121578	ENST00000483209	B2RAZ5
ENSG00000121578	ENST00000491906	C9JY35
ENSG00000121578	ENST00000493932	C9J644

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Pathways

Pathway	Source	External ID
Glycosaminoglycan biosynthesis - keratan sulfate	KEGG	ko00533
Glycosphingolipid biosynthesis - lacto and neolacto series	KEGG	ko00601
Glycosaminoglycan biosynthesis - keratan sulfate	KEGG	hsa00533
Glycosphingolipid biosynthesis - lacto and neolacto series	KEGG	hsa00601
Metabolic pathways	KEGG	hsa01100
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer	KEGG	hsa_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer	KEGG	M00071
Metabolism of proteins	REACTOME	R-HSA-392499
Post-translational protein modification	REACTOME	R-HSA-597592
Asparagine N-linked glycosylation	REACTOME	R-HSA-446203
Transport to the Golgi and subsequent modification	REACTOME	R-HSA-948021
N-glycan antennae elongation in the medial/trans-Golgi	REACTOME	R-HSA-975576
N-Glycan antennae elongation	REACTOME	R-HSA-975577
Metabolism	REACTOME	R-HSA-1430728
Metabolism of carbohydrates	REACTOME	R-HSA-71387
Glycosaminoglycan metabolism	REACTOME	R-HSA-1630316
Keratan sulfate/keratin metabolism	REACTOME	R-HSA-1638074
Keratan sulfate biosynthesis	REACTOME	R-HSA-2022854

Protein levels (Protein atlas)

Not detected

Low

Medium

High

References

Pubmed ID	Year	Title	Citations
28228616	2017	Transcriptional Mechanism of the β4-Galactosyltransferase 4 Gene in SW480 Human Colon Cancer Cell Line.	1

Citation

Dessen P

B4GALT4 (beta-1,4-galactosyltransferase 4)

Atlas Genet Cytogenet Oncol Haematol. 2018-02-01

Online version: http://atlasgeneticsoncology.org/gene/57298/b4galt4