| Nomenclature |
HGNC (Hugo) | BCL6B 1002 |
| Cards |
Entrez_Gene (NCBI) | BCL6B 255877 BCL6B transcription repressor |
Aliases | BAZF; ZBTB28; ZNF62 |
GeneCards (Weizmann) | BCL6B |
Ensembl hg19 (Hinxton) | ENSG00000161940 [Gene_View] |
Ensembl hg38 (Hinxton) | ENSG00000161940 [Gene_View]  ENSG00000161940 [Sequence] chr17:7023050-7029642 [Contig_View] BCL6B [Vega] |
ICGC DataPortal | ENSG00000161940 |
TCGA cBioPortal | BCL6B |
AceView (NCBI) | BCL6B |
Genatlas (Paris) | BCL6B |
WikiGenes | 255877 |
SOURCE (Princeton) | BCL6B |
Genetics Home Reference (NIH) | BCL6B |
| Genomic and cartography |
GoldenPath hg38 (UCSC) | BCL6B - chr17:7023050-7029642 + 17p13.1 [Description] (hg38-Dec_2013) |
GoldenPath hg19 (UCSC) | BCL6B - 17p13.1 [Description] (hg19-Feb_2009) |
GoldenPath | BCL6B - 17p13.1 [CytoView hg19] BCL6B - 17p13.1 [CytoView hg38] |
ImmunoBase | ENSG00000161940 |
Mapping of homologs : NCBI | BCL6B [Mapview hg19] BCL6B [Mapview hg38] |
OMIM | 608992 |
| Gene and transcription |
Genbank (Entrez) | AB076580 AK024695 AK122893 AK292878 AK293102 |
RefSeq transcript (Entrez) | NM_181844 |
RefSeq genomic (Entrez) | |
Consensus coding sequences : CCDS (NCBI) | BCL6B |
Cluster EST : Unigene | Hs.22575 [ NCBI ] |
CGAP (NCI) | Hs.22575 |
Alternative Splicing Gallery | ENSG00000161940 |
Gene Expression | BCL6B [ NCBI-GEO ] BCL6B [ EBI - ARRAY_EXPRESS ]
BCL6B [ SEEK ] BCL6B [ MEM ] |
Gene Expression Viewer (FireBrowse) | BCL6B [ Firebrowse - Broad ] |
SOURCE (Princeton) | Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60] |
Genevestigator | Expression in : [tissues]  [cell-lines]  [cancer]  [perturbations]   |
BioGPS (Tissue expression) | 255877 |
GTEX Portal (Tissue expression) | BCL6B |
Human Protein Atlas | ENSG00000161940-BCL6B [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
UniProt/SwissProt | Q8N143 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
NextProt | Q8N143 [Sequence] [Exons] [Medical] [Publications] |
With graphics : InterPro | Q8N143 |
Splice isoforms : SwissVar | Q8N143 |
PhosPhoSitePlus | Q8N143 |
Domaine pattern : Prosite (Expaxy) | BTB (PS50097) ZINC_FINGER_C2H2_1 (PS00028) ZINC_FINGER_C2H2_2 (PS50157) |
Domains : Interpro (EBI) | BTB/POZ_dom SKP1/BTB/POZ_sf Znf_C2H2_sf Znf_C2H2_type |
Domain families : Pfam (Sanger) | BTB (PF00651) |
Domain families : Pfam (NCBI) | pfam00651 |
Domain families : Smart (EMBL) | BTB (SM00225) ZnF_C2H2 (SM00355) |
Conserved Domain (NCBI) | BCL6B |
DMDM Disease mutations | 255877 |
Blocks (Seattle) | BCL6B |
Superfamily | Q8N143 |
Human Protein Atlas [tissue] | ENSG00000161940-BCL6B [tissue] |
Peptide Atlas | Q8N143 |
HPRD | 16414 |
IPI | IPI01014534 IPI00166071 |
| Protein Interaction databases |
DIP (DOE-UCLA) | Q8N143 |
IntAct (EBI) | Q8N143 |
FunCoup | ENSG00000161940 |
BioGRID | BCL6B |
STRING (EMBL) | BCL6B |
ZODIAC | BCL6B |
| Ontologies - Pathways |
QuickGO | Q8N143 |
Ontology : AmiGO | negative regulation of transcription by RNA polymerase II RNA polymerase II regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription repressor activity, RNA polymerase II-specific DNA binding nucleus metal ion binding |
Ontology : EGO-EBI | negative regulation of transcription by RNA polymerase II RNA polymerase II regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription repressor activity, RNA polymerase II-specific DNA binding nucleus metal ion binding |
NDEx Network | BCL6B |
Atlas of Cancer Signalling Network | BCL6B |
Wikipedia pathways | BCL6B |
| Orthology - Evolution |
OrthoDB | 255877 |
GeneTree (enSembl) | ENSG00000161940 |
Phylogenetic Trees/Animal Genes : TreeFam | BCL6B |
HOGENOM | Q8N143 |
Homologs : HomoloGene | BCL6B |
Homology/Alignments : Family Browser (UCSC) | BCL6B |
| Gene fusions - Rearrangements |
Fusion : Quiver | BCL6B |
| Polymorphisms : SNP and Copy number variants |
NCBI Variation Viewer | BCL6B [hg38] |
dbSNP Single Nucleotide Polymorphism (NCBI) | BCL6B |
dbVar | BCL6B |
ClinVar | BCL6B |
1000_Genomes | BCL6B |
Exome Variant Server | BCL6B |
ExAC (Exome Aggregation Consortium) | ENSG00000161940 |
GNOMAD Browser | ENSG00000161940 |
Varsome Browser | BCL6B |
Genetic variants : HAPMAP | 255877 |
Genomic Variants (DGV) | BCL6B [DGVbeta] |
DECIPHER | BCL6B [patients] [syndromes] [variants] [genes] |
CONAN: Copy Number Analysis | BCL6B |
| Mutations |
ICGC Data Portal | BCL6B |
TCGA Data Portal | BCL6B |
Broad Tumor Portal | BCL6B |
OASIS Portal | BCL6B [ Somatic mutations - Copy number] |
Somatic Mutations in Cancer : COSMIC | BCL6B [overview] [genome browser] [tissue] [distribution] |
Somatic Mutations in Cancer : COSMIC3D | BCL6B |
Mutations and Diseases : HGMD | BCL6B |
LOVD (Leiden Open Variation Database) | Whole genome datasets |
LOVD (Leiden Open Variation Database) | LOVD - Leiden Open Variation Database |
LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
BioMuta | search BCL6B |
DgiDB (Drug Gene Interaction Database) | BCL6B |
DoCM (Curated mutations) | BCL6B (select the gene name) |
CIViC (Clinical Interpretations of Variants in Cancer) | BCL6B (select a term) |
intoGen | BCL6B |
Cancer3D | BCL6B(select the gene name) |
Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
---|
OMIM | 608992 |
Orphanet | |
DisGeNET | BCL6B |
Medgen | BCL6B |
Genetic Testing Registry | BCL6B
|
NextProt | Q8N143 [Medical] |
TSGene | 255877 |
GENETests | BCL6B |
Target Validation | BCL6B |
Huge Navigator |
BCL6B [HugePedia] |
snp3D : Map Gene to Disease | 255877 |
BioCentury BCIQ | BCL6B |
ClinGen | BCL6B |
| Clinical trials, drugs, therapy |
---|
Chemical/Protein Interactions : CTD | 255877 |
Chemical/Pharm GKB Gene | PA25313 |
Clinical trial | BCL6B |
| Miscellaneous |
---|
canSAR (ICR) | BCL6B (select the gene name) |
DataMed Index | BCL6B |
| Probes |
---|
| Litterature |
---|
PubMed | 24 Pubmed reference(s) in Entrez |
GeneRIFs | Gene References Into Functions (Entrez) |
CoreMine | BCL6B |
EVEX | BCL6B |
GoPubMed | BCL6B |
iHOP | BCL6B |