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BLZF1 (basic leucine zipper nuclear factor 1)

Identity

Other namesGOLGIN-45
JEM-1
JEM-1s
JEM1
HGNC (Hugo) BLZF1
LocusID (NCBI) 8548
Location 1q24.2
Location_base_pair Starts at 169337194 and ends at 169365780 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)BLZF1   1065
Cards
Entrez_Gene (NCBI)BLZF1  8548  basic leucine zipper nuclear factor 1
GeneCards (Weizmann)BLZF1
Ensembl (Hinxton)ENSG00000117475 [Gene_View]  chr1:169337194-169365780 [Contig_View]  BLZF1 [Vega]
ICGC DataPortalENSG00000117475
AceView (NCBI)BLZF1
Genatlas (Paris)BLZF1
WikiGenes8548
SOURCE (Princeton)NM_003666
Genomic and cartography
GoldenPath (UCSC)BLZF1  -  1q24.2   chr1:169337194-169365780 +  1q24.2   [Description]    (hg19-Feb_2009)
EnsemblBLZF1 - 1q24.2 [CytoView]
Mapping of homologs : NCBIBLZF1 [Mapview]
OMIM608692   
Gene and transcription
Genbank (Entrez)AF288161 AK055883 AK223533 AK291725 AK307151
RefSeq transcript (Entrez)NM_003666
RefSeq genomic (Entrez)AC_000133 NC_000001 NC_018912 NT_004487 NW_001838533 NW_004929293
Consensus coding sequences : CCDS (NCBI)BLZF1
Cluster EST : UnigeneHs.130746 [ NCBI ]
CGAP (NCI)Hs.130746
Alternative Splicing : Fast-db (Paris)GSHG0001171
Alternative Splicing GalleryENSG00000117475
Gene ExpressionBLZF1 [ NCBI-GEO ]     BLZF1 [ SEEK ]   BLZF1 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H2G9 (Uniprot)
NextProtQ9H2G9  [Medical]
With graphics : InterProQ9H2G9
Splice isoforms : SwissVarQ9H2G9 (Swissvar)
Domains : Interpro (EBI)Golgin-45    Hsk3_like   
Related proteins : CluSTrQ9H2G9
Domain families : Pfam (Sanger)DASH_Hsk3 (PF08227)   
Domain families : Pfam (NCBI)pfam08227   
DMDM Disease mutations8548
Blocks (Seattle)Q9H2G9
Human Protein AtlasENSG00000117475
Peptide AtlasQ9H2G9
HPRD16367
IPIIPI00455985   IPI00386502   IPI00647811   IPI00555943   
Protein Interaction databases
DIP (DOE-UCLA)Q9H2G9
IntAct (EBI)Q9H2G9
FunCoupENSG00000117475
BioGRIDBLZF1
IntegromeDBBLZF1
STRING (EMBL)BLZF1
Ontologies - Pathways
QuickGOQ9H2G9
Ontology : AmiGOGolgi membrane  mitotic cell cycle  regulation of cell growth  DNA binding  sequence-specific DNA binding transcription factor activity  nucleus  nucleus  nucleus  nucleolus  cytoplasm  Golgi lumen  regulation of transcription from RNA polymerase II promoter  Golgi organization  cell proliferation  enzyme binding  ubiquitin protein ligase binding  Golgi to plasma membrane protein transport  
Ontology : EGO-EBIGolgi membrane  mitotic cell cycle  regulation of cell growth  DNA binding  sequence-specific DNA binding transcription factor activity  nucleus  nucleus  nucleus  nucleolus  cytoplasm  Golgi lumen  regulation of transcription from RNA polymerase II promoter  Golgi organization  cell proliferation  enzyme binding  ubiquitin protein ligase binding  Golgi to plasma membrane protein transport  
Protein Interaction DatabaseBLZF1
Wikipedia pathwaysBLZF1
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)BLZF1
SNP (GeneSNP Utah)BLZF1
SNP : HGBaseBLZF1
Genetic variants : HAPMAPBLZF1
1000_GenomesBLZF1 
ICGC programENSG00000117475 
CONAN: Copy Number AnalysisBLZF1 
Somatic Mutations in Cancer : COSMICBLZF1 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
DECIPHER (Syndromes)1:169337194-169365780
Mutations and Diseases : HGMDBLZF1
OMIM608692   
MedgenBLZF1
GENETestsBLZF1
Disease Genetic AssociationBLZF1
Huge Navigator BLZF1 [HugePedia]  BLZF1 [HugeCancerGEM]
Genomic VariantsBLZF1  BLZF1 [DGVbeta]
Exome VariantBLZF1
dbVarBLZF1
ClinVarBLZF1
snp3D : Map Gene to Disease8548
General knowledge
Homologs : HomoloGeneBLZF1
Homology/Alignments : Family Browser (UCSC)BLZF1
Phylogenetic Trees/Animal Genes : TreeFamBLZF1
Chemical/Protein Interactions : CTD8548
Chemical/Pharm GKB GenePA25375
Clinical trialBLZF1
Cancer Resource (Charite)ENSG00000117475
Other databases
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
CoreMineBLZF1
GoPubMedBLZF1
iHOPBLZF1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Nov 8 17:14:20 CET 2014

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