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BRD3OS (BRD3 opposite strand)

Identity

Alias_namesNCRNA00094
LINC00094
non-protein coding RNA 94
long intergenic non-protein coding RNA 94
Alias_symbol (synonym)FLJ35348
bA374P20.3
Other aliasLP2477
HGNC (Hugo) BRD3OS
LocusID (NCBI) 266655
Atlas_Id 57544
Location 9q34.2  [Link to chromosome band 9q34]
Location_base_pair Starts at 134025481 and ends at 134031587 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)BRD3OS   24742
Cards
Entrez_Gene (NCBI)BRD3OS  266655  BRD3 opposite strand
AliasesLINC00094; LP2477; NCRNA00094
GeneCards (Weizmann)BRD3OS
Ensembl hg19 (Hinxton)ENSG00000235106 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235106 [Gene_View]  ENSG00000235106 [Sequence]  chr9:134025481-134031587 [Contig_View]  BRD3OS [Vega]
ICGC DataPortalENSG00000235106
TCGA cBioPortalBRD3OS
AceView (NCBI)BRD3OS
Genatlas (Paris)BRD3OS
WikiGenes266655
SOURCE (Princeton)BRD3OS
Genetics Home Reference (NIH)BRD3OS
Genomic and cartography
GoldenPath hg38 (UCSC)BRD3OS  -     chr9:134025481-134031587 +  9q34.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BRD3OS  -     9q34.2   [Description]    (hg19-Feb_2009)
GoldenPathBRD3OS - 9q34.2 [CytoView hg19]  BRD3OS - 9q34.2 [CytoView hg38]
Genome Data Viewer NCBIBRD3OS [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK092667 AY203934 BC053543 BC065204 BC094875
RefSeq transcript (Entrez)NM_001355256
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BRD3OS
Alternative Splicing GalleryENSG00000235106
Gene ExpressionBRD3OS [ NCBI-GEO ]   BRD3OS [ EBI - ARRAY_EXPRESS ]   BRD3OS [ SEEK ]   BRD3OS [ MEM ]
Gene Expression Viewer (FireBrowse)BRD3OS [ Firebrowse - Broad ]
GenevisibleExpression of BRD3OS in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)266655
GTEX Portal (Tissue expression)BRD3OS
Human Protein AtlasENSG00000235106-BRD3OS [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BRD3OS
DMDM Disease mutations266655
Human Protein Atlas [tissue]ENSG00000235106-BRD3OS [tissue]
IPIIPI00428741   
Protein Interaction databases
FunCoupENSG00000235106
BioGRIDBRD3OS
STRING (EMBL)BRD3OS
ZODIACBRD3OS
Ontologies - Pathways
snp3D : Map Gene to Disease266655
BioCentury BCIQBRD3OS
ClinGenBRD3OS
Clinical trials, drugs, therapy
Protein Interactions : CTD266655
Pharm GKB GenePA164723633
Clinical trialBRD3OS
Miscellaneous
canSAR (ICR)BRD3OS (select the gene name)
HarmonizomeBRD3OS
DataMed IndexBRD3OS
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBRD3OS
EVEXBRD3OS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Jul 11 19:40:56 CEST 2020

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