Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

BRWD1-AS2 (BRWD1 antisense RNA 2)

Identity

Other aliasBRWD1-IT2
C21orf87
NCRNA00257
HGNC (Hugo) BRWD1-AS2
LocusID (NCBI) 103091865
Atlas_Id 80430
Location 21q22.2  [Link to chromosome band 21q22]
Location_base_pair Starts at 39313907 and ends at 39314915 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)BRWD1-AS2   16423
Cards
Entrez_Gene (NCBI)BRWD1-AS2  103091865  BRWD1 antisense RNA 2
AliasesBRWD1-IT2; C21orf87; NCRNA00257
GeneCards (Weizmann)BRWD1-AS2
Ensembl hg19 (Hinxton)ENSG00000255568 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255568 [Gene_View]  ENSG00000255568 [Sequence]  chr21:39313907-39314915 [Contig_View]  BRWD1-AS2 [Vega]
ICGC DataPortalENSG00000255568
TCGA cBioPortalBRWD1-AS2
AceView (NCBI)BRWD1-AS2
Genatlas (Paris)BRWD1-AS2
WikiGenes103091865
SOURCE (Princeton)BRWD1-AS2
Genetics Home Reference (NIH)BRWD1-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)BRWD1-AS2  -     chr21:39313907-39314915 +  21q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)BRWD1-AS2  -     21q22.2   [Description]    (hg19-Feb_2009)
GoldenPathBRWD1-AS2 - 21q22.2 [CytoView hg19]  BRWD1-AS2 - 21q22.2 [CytoView hg38]
ImmunoBaseENSG00000255568
Mapping of homologs : NCBIBRWD1-AS2 [Mapview hg19]  BRWD1-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA281157 HY025107
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)BRWD1-AS2
Cluster EST : UnigeneHs.729612 [ NCBI ]
CGAP (NCI)Hs.729612
Alternative Splicing GalleryENSG00000255568
Gene ExpressionBRWD1-AS2 [ NCBI-GEO ]   BRWD1-AS2 [ EBI - ARRAY_EXPRESS ]   BRWD1-AS2 [ SEEK ]   BRWD1-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)BRWD1-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)103091865
GTEX Portal (Tissue expression)BRWD1-AS2
Human Protein AtlasENSG00000255568-BRWD1-AS2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP59051   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP59051  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP59051
Splice isoforms : SwissVarP59051
PhosPhoSitePlusP59051
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)BRWD1-AS2
DMDM Disease mutations103091865
Blocks (Seattle)BRWD1-AS2
SuperfamilyP59051
Human Protein Atlas [tissue]ENSG00000255568-BRWD1-AS2 [tissue]
Peptide AtlasP59051
Protein Interaction databases
DIP (DOE-UCLA)P59051
IntAct (EBI)P59051
FunCoupENSG00000255568
BioGRIDBRWD1-AS2
STRING (EMBL)BRWD1-AS2
ZODIACBRWD1-AS2
Ontologies - Pathways
QuickGOP59051
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkBRWD1-AS2
Atlas of Cancer Signalling NetworkBRWD1-AS2
Wikipedia pathwaysBRWD1-AS2
Orthology - Evolution
OrthoDB103091865
GeneTree (enSembl)ENSG00000255568
Phylogenetic Trees/Animal Genes : TreeFamBRWD1-AS2
HOGENOMP59051
Homologs : HomoloGeneBRWD1-AS2
Homology/Alignments : Family Browser (UCSC)BRWD1-AS2
Gene fusions - Rearrangements
Fusion : QuiverBRWD1-AS2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerBRWD1-AS2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)BRWD1-AS2
dbVarBRWD1-AS2
ClinVarBRWD1-AS2
1000_GenomesBRWD1-AS2 
Exome Variant ServerBRWD1-AS2
ExAC (Exome Aggregation Consortium)ENSG00000255568
GNOMAD BrowserENSG00000255568
Varsome BrowserBRWD1-AS2
Genetic variants : HAPMAP103091865
Genomic Variants (DGV)BRWD1-AS2 [DGVbeta]
DECIPHERBRWD1-AS2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisBRWD1-AS2 
Mutations
ICGC Data PortalBRWD1-AS2 
TCGA Data PortalBRWD1-AS2 
Broad Tumor PortalBRWD1-AS2
OASIS PortalBRWD1-AS2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDBRWD1-AS2
BioMutasearch BRWD1-AS2
DgiDB (Drug Gene Interaction Database)BRWD1-AS2
DoCM (Curated mutations)BRWD1-AS2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)BRWD1-AS2 (select a term)
intoGenBRWD1-AS2
Cancer3DBRWD1-AS2(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETBRWD1-AS2
MedgenBRWD1-AS2
Genetic Testing Registry BRWD1-AS2
NextProtP59051 [Medical]
TSGene103091865
GENETestsBRWD1-AS2
Target ValidationBRWD1-AS2
Huge Navigator BRWD1-AS2 [HugePedia]
snp3D : Map Gene to Disease103091865
BioCentury BCIQBRWD1-AS2
ClinGenBRWD1-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD103091865
Clinical trialBRWD1-AS2
Miscellaneous
canSAR (ICR)BRWD1-AS2 (select the gene name)
DataMed IndexBRWD1-AS2
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineBRWD1-AS2
EVEXBRWD1-AS2
GoPubMedBRWD1-AS2
iHOPBRWD1-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:20:51 CEST 2019

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.