Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

C2orf68 (chromosome 2 open reading frame 68)

Identity

Other names-
HGNC (Hugo) C2orf68
LocusID (NCBI) 388969
Location 2p11.2
Location_base_pair Starts at 85832376 and ends at 85839179 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)C2orf68   34353
Entrez_Gene (NCBI)C2orf68  388969  chromosome 2 open reading frame 68
Cards
GeneCards (Weizmann)C2orf68
Ensembl (Hinxton)ENSG00000168887 [Gene_View]  chr2:85832376-85839179 [Contig_View]  C2orf68 [Vega]
AceView (NCBI)C2orf68
Genatlas (Paris)C2orf68
SOURCE (Stanford)NM_001013649
Genomic and cartography
GoldenPath (UCSC)C2orf68  -  2p11.2   chr2:85832376-85839179 -  2p11.2   [Description]    (hg19-Feb_2009)
EnsemblC2orf68 - 2p11.2 [CytoView]
Mapping of homologs : NCBIC2orf68 [Mapview]
Gene and transcription
Genbank (Entrez)AK024174 AK092972 AK124808 AK300003 AK311297
RefSeq transcript (SRS)NM_001013649
RefSeq transcript (Entrez)NM_001013649
RefSeq genomic (SRS)AC_000134 NC_000002 NC_018913 NT_022184 NW_001838769 NW_004078005
RefSeq genomic (Entrez)AC_000134 NC_000002 NC_018913 NT_022184 NW_001838769 NW_004078005
Consensus coding sequences : CCDS (NCBI)C2orf68
Cluster EST : UnigeneHs.516159 [ SRS ] Hs.516159 [ NCBI ]
CGAP (NCI)Hs.516159
Alternative Splicing : Fast-db (Paris)GSHG0017776
Alternative Splicing GalleryENSG00000168887
Gene ExpressionC2orf68 [ NCBI-GEO ]   C2orf68 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2NKX9 (SRS) Q2NKX9 (Uniprot)
NextProtQ2NKX9
With graphics : InterProQ2NKX9
Splice isoforms : SwissVarQ2NKX9(Swissvar)
Domains : Interpro (SRS)UPF0561   
Domains : Interpro (EBI)UPF0561   
Related proteins : CluSTrQ2NKX9
Domain families : Pfam (SRS)UPF0561 (PF10573)   
Domain families : Pfam (Sanger)UPF0561 (PF10573)   
Domain families : Pfam (NCBI)pfam10573   
DMDM388969
Blocks (Seattle)Q2NKX9
Human Protein AtlasENSG00000168887
HPRD18391
IPIIPI00419111   IPI00874184   IPI00645115   IPI00925018   
Protein Interaction databases
DIP (DOE-UCLA)Q2NKX9
IntAct (EBI)Q2NKX9
FunCoupENSG00000168887
REACTOMEC2orf68
Protein Interaction Database388969
BioGRIDC2orf68
InParanoidQ2NKX9
Interologous Interaction database Q2NKX9
IntegromeDBC2orf68
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)C2orf68
SNP (GeneSNP Utah)C2orf68
SNP : HGBaseC2orf68
Genetic variants : HAPMAPC2orf68
Somatic Mutations in Cancer : COSMICC2orf68 
CONAN: Copy Number AnalysisC2orf68 
Mutations and Diseases : HGMDC2orf68
OMIM
GENETests
Disease Genetic AssociationC2orf68
Huge Navigator C2orf68 [HugePedia]  C2orf68 [HugeCancerGEM]
Genomic VariantsC2orf68  C2orf68 [DGVbeta]
snp3D : Map Gene to Disease388969
General knowledge
Homologs : HomoloGeneC2orf68
Homology/Alignments : Family Browser (UCSC)C2orf68
Phylogenetic Trees/Animal Genes : TreeFamC2orf68
Chemical/Protein Interactions : CTD388969
Chemical/Pharm GKB GenePA162379474
Clinical trialC2orf68
Cancer Resource (Charite)ENSG00000168887
Ontology : AmiGO
Ontology : EGO-EBI
Other databases
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
PubGeneC2orf68
iHOPC2orf68
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:42:34 CEST 2013
Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.