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CAB39L (calcium binding protein 39-like)

Identity

Other namesMO25-BETA
MO2L
bA103J18.3
HGNC (Hugo) CAB39L
LocusID (NCBI) 81617
Location 13q14.2
Location_base_pair Starts at 49882786 and ends at 50018221 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CAB39L   20290
Entrez_Gene (NCBI)CAB39L  81617  calcium binding protein 39-like
Cards
GeneCards (Weizmann)CAB39L
Ensembl (Hinxton)ENSG00000102547 [Gene_View]  chr13:49882786-50018221 [Contig_View]  CAB39L [Vega]
AceView (NCBI)CAB39L
Genatlas (Paris)CAB39L
SOURCE (Stanford)NM_001079670 NM_030925
Genomic and cartography
GoldenPath (UCSC)CAB39L  -  13q14.2   chr13:49882786-50018221 -  13q14.2   [Description]    (hg19-Feb_2009)
EnsemblCAB39L - 13q14.2 [CytoView]
Mapping of homologs : NCBICAB39L [Mapview]
OMIM612175   
Gene and transcription
Genbank (Entrez)AA278473 AK022639 AK309011 AY211923 AY288977
RefSeq transcript (SRS)NM_001079670 NM_030925
RefSeq transcript (Entrez)NM_001079670 NM_030925
RefSeq genomic (SRS)AC_000145 NC_000013 NC_018924 NT_024524 NW_001838074 NW_004078077
RefSeq genomic (Entrez)AC_000145 NC_000013 NC_018924 NT_024524 NW_001838074 NW_004078077
Consensus coding sequences : CCDS (NCBI)CAB39L
Cluster EST : UnigeneHs.87159 [ SRS ] Hs.87159 [ NCBI ]
CGAP (NCI)Hs.87159
Alternative Splicing : Fast-db (Paris)GSHG0008487
Alternative Splicing GalleryENSG00000102547
Gene ExpressionCAB39L [ NCBI-GEO ]   CAB39L [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H9S4 (SRS) Q9H9S4 (Uniprot)
NextProtQ9H9S4
With graphics : InterProQ9H9S4
Splice isoforms : SwissVarQ9H9S4(Swissvar)
Domains : Interpro (SRS)ARM-like    ARM-type_fold    Mo25   
Domains : Interpro (EBI)ARM-like    ARM-type_fold    Mo25   
Related proteins : CluSTrQ9H9S4
Domain families : Pfam (SRS)Mo25 (PF08569)   
Domain families : Pfam (Sanger)Mo25 (PF08569)   
Domain families : Pfam (NCBI)pfam08569   
DMDM81617
Blocks (Seattle)Q9H9S4
Human Protein AtlasENSG00000102547
HPRD12993
IPIIPI00026359   IPI00514062   IPI00783429   IPI00844534   IPI00917474   IPI00916672   IPI00916547   
Protein Interaction databases
DIP (DOE-UCLA)Q9H9S4
IntAct (EBI)Q9H9S4
FunCoupENSG00000102547
REACTOMECAB39L
Protein Interaction Database81617
BioGRIDCAB39L
InParanoidQ9H9S4
Interologous Interaction database Q9H9S4
IntegromeDBCAB39L
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CAB39L
SNP (GeneSNP Utah)CAB39L
SNP : HGBaseCAB39L
Genetic variants : HAPMAPCAB39L
Somatic Mutations in Cancer : COSMICCAB39L 
CONAN: Copy Number AnalysisCAB39L 
Mutations and Diseases : HGMDCAB39L
OMIM612175   
GENETests612175   
Disease Genetic AssociationCAB39L
Huge Navigator CAB39L [HugePedia]  CAB39L [HugeCancerGEM]
Genomic VariantsCAB39L  CAB39L [DGVbeta]
snp3D : Map Gene to Disease81617
General knowledge
Homologs : HomoloGeneCAB39L
Homology/Alignments : Family Browser (UCSC)CAB39L
Phylogenetic Trees/Animal Genes : TreeFamCAB39L
Chemical/Protein Interactions : CTD81617
Chemical/Pharm GKB GenePA134913801
Clinical trialCAB39L
Cancer Resource (Charite)ENSG00000102547
Ontology : AmiGOcytosol  cell cycle arrest  insulin receptor signaling pathway  regulation of fatty acid oxidation  
Ontology : EGO-EBIcytosol  cell cycle arrest  insulin receptor signaling pathway  regulation of fatty acid oxidation  
Other databases
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
PubGeneCAB39L
iHOPCAB39L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:32:34 CEST 2013
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