CALN1 (calneuron 1)

2018-02-01  

Identity

HGNC
CALN1
LOCATION
7q11.22
LOCUSID
83698
ALIAS
CABP8
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 83698
MIM: 607176
HGNC: 13248
Ensembl: ENSG00000183166

Variants:

dbSNP: 83698
ClinVar: 83698
TCGA: ENSG00000183166
COSMIC: CALN1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000183166ENST00000329008Q9BXU9
ENSG00000183166ENST00000329008A4D1Z1
ENSG00000183166ENST00000395275Q9BXU9
ENSG00000183166ENST00000395276Q9BXU9
ENSG00000183166ENST00000395276A4D1Z1
ENSG00000183166ENST00000405452A0A0A0MSB7
ENSG00000183166ENST00000431984Q9BXU9
ENSG00000183166ENST00000431984A4D1Z1
ENSG00000183166ENST00000446128E9PFU3

Expression (GTEx)

0
10
20
30
40
50
60
70
80
90
100
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
193387612009Membrane targeting of the EF-hand containing calcium-sensing proteins CaBP7 and CaBP8.12
296264702018Exosomal miR-675 from metastatic osteosarcoma promotes cell migration and invasion by targeting CALN1.12
262068632015Loci with genome-wide associations with schizophrenia in the Han Chinese population.9
291091912018Calneuron 1 Increased Ca2+ in the Endoplasmic Reticulum and Aldosterone Production in Aldosterone-Producing Adenoma.9
269913962016Schizophrenia risk variants in ITIH4 and CALN1 regulate gene expression in the dorsolateral prefrontal cortex.5
261634622015Experimental validation of candidate schizophrenia gene CALN1 as a target for microRNA-137.4
261166282015Alternative splicing, expression and cellular localization of Calneuron-1 in the rat and human brain.2

Citation

Dessen P

CALN1 (calneuron 1)

Atlas Genet Cytogenet Oncol Haematol. 2018-02-01

Online version: http://atlasgeneticsoncology.org/gene/57301/caln1