CCSER2 (coiled-coil serine rich protein 2)

2014-08-01  

Identity

HGNC
CCSER2
LOCATION
10q23.1
LOCUSID
54462
ALIAS
FAM190B,Gcap14,KIAA1128,bA486O22.1
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 54462
HGNC: 29197
Ensembl: ENSG00000107771

Variants:

dbSNP: 54462
ClinVar: 54462
TCGA: ENSG00000107771
COSMIC: CCSER2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000107771ENST00000224756Q9H7U1
ENSG00000107771ENST00000359979Q9H7U1
ENSG00000107771ENST00000372088Q9H7U1
ENSG00000107771ENST00000466105A0A2R8YGE2
ENSG00000107771ENST00000480006A0A2R8Y7M2
ENSG00000107771ENST00000493409A0A2R8YGU6
ENSG00000107771ENST00000494586A0A2R8Y6V5
ENSG00000107771ENST00000543283Q9H7U1

Expression (GTEx)

0
10
20
30
40
50
60
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
163854512006A scan of chromosome 10 identifies a novel locus showing strong association with late-onset Alzheimer disease.69
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62

Citation

Dessen P

CCSER2 (coiled-coil serine rich protein 2)

Atlas Genet Cytogenet Oncol Haematol. 2014-08-01

Online version: http://atlasgeneticsoncology.org/gene/54206/ccser2