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CEBPE (CCAAT/enhancer binding protein (C/EBP), epsilon)

Identity

Other namesC/EBP-epsilon
CRP1
HGNC (Hugo) CEBPE
Location 14q11.2
Location_base_pair Starts at 22656355 and ends at 22658314 bp from pter ( according to hg18-March_2006)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CEBPE   1836
Entrez_Gene (NCBI)CEBPE  1053  CCAAT/enhancer binding protein (C/EBP), epsilon
Cards
GeneCards (Weizmann)CEBPE
Ensembl (Hinxton)ENSG00000092067 [Gene_View]  CEBPE [Vega]
AceView (NCBI)CEBPE
Genatlas (Paris)CEBPE
euGene (Indiana)1053
SOURCE (Stanford)NM_001805
Gene Expression (Array Express) ENSG00000092067
Genomic and cartography
GoldenPath (UCSC)CEBPE  -  14q11.2   chr14:22656355-22658314 -  14q11.2   [Description]    (hg18-March_2006)
EnsemblCEBPE - 14q11.2 [CytoView]
Mapping of homologs : NCBICEBPE [Mapview]
OMIM245480   600749   
Gene and transcription
Gene : Genbank (Entrez)BC035797 BG387972 CR594219 EU446853 EU831797
Reference sequence (RefSeq transcript) :SRSNM_001805
Reference transcript : EntrezNM_001805
RefSeq genomic : SRSAC_000057 AC_000146 NC_000014 NG_009617 NT_026437 NW_001838110 NW_925539
RefSeq genomic : EntrezAC_000057 AC_000146 NC_000014 NG_009617 NT_026437 NW_001838110 NW_925539
Consensus coding sequences : CCDS NCBICEBPE
Cluster EST : UnigeneHs.558308 [ SRS ] Hs.558308 [ NCBI ]
Alternative Splicing : Fast-db (Paris)70
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtQ15744 (SRS) Q15744 (Expasy) Q15744 (Uniprot)
With graphics : InterProQ15744
Splice isoforms : VarSplice FASTAQ15744(VarSplice FASTA)
Domaine pattern : Prosite (SRS)BZIP (PS50217)    BZIP_BASIC (PS00036)   
Domain pattern : Prosite (Expaxy)BZIP (PS50217)    BZIP_BASIC (PS00036)   
Domains : Interpro (SRS)bZIP_2    CCAAT/enhancer-binding    TF_bZIP   
Domains : Interpro (EBI)bZIP_2    CCAAT/enhancer-binding    TF_bZIP   
Related proteins : CluSTrQ15744
Domain families : Pfam SRSbZIP_2 (PF07716)   
Domain families : Pfam SangerbZIP_2 (PF07716)   
Domain families : Pfam NCBIpfam07716   
Domain families : Smart EMBLBRLZ (SM00338)  
Blocks (Seattle)Q15744
Crystal structure of protein : PDB SRS
Crystal structure of protein : PDBSum
Crystal structure of protein : IMB
Crystal structure of protein : PDB RSDB
HPRD02852
Protein Interaction databases
DIP (DOE-UCLA)Q15744
IntAct (EBI)Q15744
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBICEBPE
SNP : GeneSNP UtahCEBPE
SNP : HGBaseCEBPE
Genetic variants : HAPMAPCEBPE
Somatic Mutations in Cancer : COSMICCEBPE 
Mutations and Diseases : HGMDCEBPE
Hereditary diseases : OMIM245480    600749   
Hereditary diseases : GENETests245480    600749   
Diseases : Genetic AssociationCEBPE
General knowledge
Homologs : HomoloGeneCEBPE
Homology/Alignments : Family Browser UCSCCEBPE
Phylogenetic Trees/Animal Genes : TreeFamCEBPE
Chemical/Protein Interactions : CTD1053
Keywords Ontology : AmiGOtranscription factor activity  nucleus  nucleolus  regulation of transcription, DNA-dependent  phagocytosis  transcription activator activity  myeloid cell differentiation  macrophage differentiation  cytokine biosynthetic process  defense response to bacterium  protein homodimerization activity  sequence-specific DNA binding  protein heterodimerization activity  
Keywords Ontology : EGO-EBItranscription factor activity  nucleus  nucleolus  regulation of transcription, DNA-dependent  phagocytosis  transcription activator activity  myeloid cell differentiation  macrophage differentiation  cytokine biosynthetic process  defense response to bacterium  protein homodimerization activity  sequence-specific DNA binding  protein heterodimerization activity  
Pathways : BIOCARTA
Pathways : KEGG
Other databases
Probes
Probes : ImagenesCEBPE Related clones (RZPD - Berlin)
Literature
PubMed35 Pubmed reference(s) in Entrez
PubGeneCEBPE
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated03-2009Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Feb 27 10:38:20 CET 2010
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