Atlas of Genetics and Cytogenetics in Oncology and Haematology

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CEMIP2 (cell migration inducing hyaluronidase 2)

Identity

Alias_namesTMEM2
transmembrane protein 2
Other alias
HGNC (Hugo) CEMIP2
LocusID (NCBI) 23670
Atlas_Id 57091
Location 9q21.13  [Link to chromosome band 9q21]
Location_base_pair Starts at 71683366 and ends at 71768884 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)CEMIP2   11869
Cards
Entrez_Gene (NCBI)CEMIP2  23670  cell migration inducing hyaluronidase 2
AliasesTMEM2
GeneCards (Weizmann)CEMIP2
Ensembl hg19 (Hinxton)ENSG00000135048 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000135048 [Gene_View]  ENSG00000135048 [Sequence]  chr9:71683366-71768884 [Contig_View]  CEMIP2 [Vega]
ICGC DataPortalENSG00000135048
TCGA cBioPortalCEMIP2
AceView (NCBI)CEMIP2
Genatlas (Paris)CEMIP2
WikiGenes23670
SOURCE (Princeton)CEMIP2
Genetics Home Reference (NIH)CEMIP2
Genomic and cartography
GoldenPath hg38 (UCSC)CEMIP2  -     chr9:71683366-71768884 -  9q21.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CEMIP2  -     9q21.13   [Description]    (hg19-Feb_2009)
GoldenPathCEMIP2 - 9q21.13 [CytoView hg19]  CEMIP2 - 9q21.13 [CytoView hg38]
ImmunoBaseENSG00000135048
Mapping of homologs : NCBICEMIP2 [Mapview hg19]  CEMIP2 [Mapview hg38]
OMIM605835   
Gene and transcription
Genbank (Entrez)AB037833 AF137030 AK027818 AK075370 AK300405
RefSeq transcript (Entrez)NM_001135820 NM_001349784 NM_013390
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CEMIP2
Cluster EST : UnigeneHs.494146 [ NCBI ]
CGAP (NCI)Hs.494146
Alternative Splicing GalleryENSG00000135048
Gene ExpressionCEMIP2 [ NCBI-GEO ]   CEMIP2 [ EBI - ARRAY_EXPRESS ]   CEMIP2 [ SEEK ]   CEMIP2 [ MEM ]
Gene Expression Viewer (FireBrowse)CEMIP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23670
GTEX Portal (Tissue expression)CEMIP2
Human Protein AtlasENSG00000135048-CEMIP2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UHN6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UHN6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UHN6
Splice isoforms : SwissVarQ9UHN6
PhosPhoSitePlusQ9UHN6
Domaine pattern : Prosite (Expaxy)G8 (PS51484)   
Domains : Interpro (EBI)G8_domain    Pectin_lyase_fold/virulence   
Domain families : Pfam (Sanger)G8 (PF10162)   
Domain families : Pfam (NCBI)pfam10162   
Domain families : Smart (EMBL)G8 (SM01225)  
Conserved Domain (NCBI)CEMIP2
DMDM Disease mutations23670
Blocks (Seattle)CEMIP2
SuperfamilyQ9UHN6
Human Protein Atlas [tissue]ENSG00000135048-CEMIP2 [tissue]
Peptide AtlasQ9UHN6
IPIIPI00170706   IPI01011640   IPI00911057   IPI00513764   IPI00513851   IPI00644795   IPI01022732   
Protein Interaction databases
DIP (DOE-UCLA)Q9UHN6
IntAct (EBI)Q9UHN6
FunCoupENSG00000135048
BioGRIDCEMIP2
STRING (EMBL)CEMIP2
ZODIACCEMIP2
Ontologies - Pathways
QuickGOQ9UHN6
Ontology : AmiGOangiogenesis  hyalurononglucosaminidase activity  calcium ion binding  integral component of plasma membrane  integral component of membrane  hyaluronan catabolic process  cadherin binding  extracellular exosome  regulation of sprouting angiogenesis  
Ontology : EGO-EBIangiogenesis  hyalurononglucosaminidase activity  calcium ion binding  integral component of plasma membrane  integral component of membrane  hyaluronan catabolic process  cadherin binding  extracellular exosome  regulation of sprouting angiogenesis  
NDEx NetworkCEMIP2
Atlas of Cancer Signalling NetworkCEMIP2
Wikipedia pathwaysCEMIP2
Orthology - Evolution
OrthoDB23670
GeneTree (enSembl)ENSG00000135048
Phylogenetic Trees/Animal Genes : TreeFamCEMIP2
HOGENOMQ9UHN6
Homologs : HomoloGeneCEMIP2
Homology/Alignments : Family Browser (UCSC)CEMIP2
Gene fusions - Rearrangements
Fusion : QuiverCEMIP2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCEMIP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CEMIP2
dbVarCEMIP2
ClinVarCEMIP2
1000_GenomesCEMIP2 
Exome Variant ServerCEMIP2
ExAC (Exome Aggregation Consortium)ENSG00000135048
GNOMAD BrowserENSG00000135048
Varsome BrowserCEMIP2
Genetic variants : HAPMAP23670
Genomic Variants (DGV)CEMIP2 [DGVbeta]
DECIPHERCEMIP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCEMIP2 
Mutations
ICGC Data PortalCEMIP2 
TCGA Data PortalCEMIP2 
Broad Tumor PortalCEMIP2
OASIS PortalCEMIP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCEMIP2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCEMIP2
Mutations and Diseases : HGMDCEMIP2
BioMutasearch CEMIP2
DgiDB (Drug Gene Interaction Database)CEMIP2
DoCM (Curated mutations)CEMIP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CEMIP2 (select a term)
intoGenCEMIP2
Cancer3DCEMIP2(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605835   
Orphanet
DisGeNETCEMIP2
MedgenCEMIP2
Genetic Testing Registry CEMIP2
NextProtQ9UHN6 [Medical]
TSGene23670
GENETestsCEMIP2
Target ValidationCEMIP2
Huge Navigator CEMIP2 [HugePedia]
snp3D : Map Gene to Disease23670
BioCentury BCIQCEMIP2
ClinGenCEMIP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23670
Chemical/Pharm GKB GenePA36570
Clinical trialCEMIP2
Miscellaneous
canSAR (ICR)CEMIP2 (select the gene name)
DataMed IndexCEMIP2
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCEMIP2
EVEXCEMIP2
GoPubMedCEMIP2
iHOPCEMIP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Nov 13 17:36:49 CET 2019
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