CMC2 (C-X9-C motif containing 2)

2011-11-01  

Identity

HGNC
CMC2
LOCATION
16q23.2
LOCUSID
56942
ALIAS
2310061C15Rik,C16orf61,DC13
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 56942
HGNC: 24447
Ensembl: ENSG00000103121

Variants:

dbSNP: 56942
ClinVar: 56942
TCGA: ENSG00000103121
COSMIC: CMC2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000103121ENST00000219400Q9NRP2
ENSG00000103121ENST00000486645H3BRC3
ENSG00000103121ENST00000561614H3BQQ1
ENSG00000103121ENST00000562713H3BNN8
ENSG00000103121ENST00000564174H3BPP2
ENSG00000103121ENST00000564249Q9NRP2
ENSG00000103121ENST00000565108H3BPP2
ENSG00000103121ENST00000565613H3BNN8
ENSG00000103121ENST00000565650Q9NRP2
ENSG00000103121ENST00000565914Q9NRP2
ENSG00000103121ENST00000565925H3BNN8
ENSG00000103121ENST00000567593H3BN28
ENSG00000103121ENST00000568228H3BP68
ENSG00000103121ENST00000570086H3BP68
ENSG00000103121ENST00000570195H3BTB6
ENSG00000103121ENST00000630396H3BTB6

Expression (GTEx)

0
5
10
15
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Metabolism of proteinsREACTOMER-HSA-392499
Mitochondrial protein importREACTOMER-HSA-1268020

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
214243802011Potential novel candidate polymorphisms identified in genome-wide association study for breast cancer susceptibility.24
198442552010Fine mapping and association studies of a high-density lipoprotein cholesterol linkage region on chromosome 16 in French-Canadian subjects.9

Citation

Dessen P

CMC2 (C-X9-C motif containing 2)

Atlas Genet Cytogenet Oncol Haematol. 2011-11-01

Online version: http://atlasgeneticsoncology.org/gene/52499/cmc2