Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CPHXL (cytoplasmic polyadenylated homeobox like)

Identity

Other aliasCPHXL1
HGNC (Hugo) CPHXL
LocusID (NCBI) 105371346
Atlas_Id 80401
Location 16q23.1  [Link to chromosome band 16q23]
Location_base_pair Starts at 75714131 and ends at 75726490 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)CPHXL   51815
Cards
Entrez_Gene (NCBI)CPHXL  105371346  cytoplasmic polyadenylated homeobox like
AliasesCPHXL1
GeneCards (Weizmann)CPHXL
Ensembl hg19 (Hinxton)ENSG00000283755 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000283755 [Gene_View]  ENSG00000283755 [Sequence]  chr16:75714131-75726490 [Contig_View]  CPHXL [Vega]
ICGC DataPortalENSG00000283755
TCGA cBioPortalCPHXL
AceView (NCBI)CPHXL
Genatlas (Paris)CPHXL
WikiGenes105371346
SOURCE (Princeton)CPHXL
Genetics Home Reference (NIH)CPHXL
Genomic and cartography
GoldenPath hg38 (UCSC)CPHXL  -     chr16:75714131-75726490 -  16q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CPHXL  -     16q23.1   [Description]    (hg19-Feb_2009)
GoldenPathCPHXL - 16q23.1 [CytoView hg19]  CPHXL - 16q23.1 [CytoView hg38]
ImmunoBaseENSG00000283755
genome Data Viewer NCBICPHXL [Mapview hg19]  
OMIM618700   
Gene and transcription
Genbank (Entrez)LN651082 LN651083
RefSeq transcript (Entrez)NM_001355613
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CPHXL
Alternative Splicing GalleryENSG00000283755
Gene ExpressionCPHXL [ NCBI-GEO ]   CPHXL [ EBI - ARRAY_EXPRESS ]   CPHXL [ SEEK ]   CPHXL [ MEM ]
Gene Expression Viewer (FireBrowse)CPHXL [ Firebrowse - Broad ]
GenevisibleExpression of CPHXL in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105371346
GTEX Portal (Tissue expression)CPHXL
Human Protein AtlasENSG00000283755-CPHXL [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CPHXL
DMDM Disease mutations105371346
Blocks (Seattle)CPHXL
Human Protein Atlas [tissue]ENSG00000283755-CPHXL [tissue]
Protein Interaction databases
FunCoupENSG00000283755
BioGRIDCPHXL
STRING (EMBL)CPHXL
ZODIACCPHXL
Ontologies - Pathways
Huge Navigator CPHXL [HugePedia]
snp3D : Map Gene to Disease105371346
BioCentury BCIQCPHXL
ClinGenCPHXL
Clinical trials, drugs, therapy
Protein Interactions : CTD105371346
Clinical trialCPHXL
Miscellaneous
canSAR (ICR)CPHXL (select the gene name)
HarmonizomeCPHXL
DataMed IndexCPHXL
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCPHXL
EVEXCPHXL
GoPubMedCPHXL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jul 10 19:58:58 CEST 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.