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CTNNA2 (catenin alpha 2)

Identity

Alias (NCBI)CAP-R
CAPR
CDCBM9
CT114
CTNR
HGNC (Hugo) CTNNA2
HGNC Alias symbCAP-R
CT114
HGNC Alias namecadherin-associated protein, related
 cancer/testis antigen 114
 alpha-N-catenin
HGNC Previous namecatenin (cadherin-associated protein), alpha 2
LocusID (NCBI) 1496
Atlas_Id 53898
Location 2p12  [Link to chromosome band 2p12]
Location_base_pair Starts at 79512934 and ends at 80648863 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AIG1 (6q24.2) / CTNNA2 (2p12)CTNNA2 (2p12) / AC084193.1 ()CTNNA2 (2p12) / CTNNA2 (2p12)
CTNNA2 (2p12) / RNU5F-1 (1q41)CTNNA2 (2p12) / UBXN4 (2q21.3)GLIS3 (9p24.2) / CTNNA2 (2p12)
HIBCH (2q32.2) / CTNNA2 (2p12)MAGI2 (7q21.11) / CTNNA2 (2p12)MRPL35 (2p11.2) / CTNNA2 (2p12)
PIGN (18q21.33) / CTNNA2 (2p12)PIGT (20q13.12) / CTNNA2 (2p12)GLIS3 9p24.2 / CTNNA2 2p12
HIBCH 2q32.2 / CTNNA2 2p12MRPL35 2p11.2 / CTNNA2 2p12PIGN 18q21.33 / CTNNA2 2p12

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 2 ]
  t(6;11)(q27;q23) KMT2A/AFDN
t(10;10)(p12;q21) CTNNA3/ARHGAP21


External links

Nomenclature
HGNC (Hugo)CTNNA2   2510
Cards
Entrez_Gene (NCBI)CTNNA2    catenin alpha 2
AliasesCAP-R; CAPR; CDCBM9; CT114; 
CTNR
GeneCards (Weizmann)CTNNA2
Ensembl hg19 (Hinxton)ENSG00000066032 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000066032 [Gene_View]  ENSG00000066032 [Sequence]  chr2:79512934-80648863 [Contig_View]  CTNNA2 [Vega]
ICGC DataPortalENSG00000066032
TCGA cBioPortalCTNNA2
AceView (NCBI)CTNNA2
Genatlas (Paris)CTNNA2
SOURCE (Princeton)CTNNA2
Genetics Home Reference (NIH)CTNNA2
Genomic and cartography
GoldenPath hg38 (UCSC)CTNNA2  -     chr2:79512934-80648863 +  2p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CTNNA2  -     2p12   [Description]    (hg19-Feb_2009)
GoldenPathCTNNA2 - 2p12 [CytoView hg19]  CTNNA2 - 2p12 [CytoView hg38]
ImmunoBaseENSG00000066032
genome Data Viewer NCBICTNNA2 [Mapview hg19]  
OMIM114025   618174   
Gene and transcription
Genbank (Entrez)AK127226 AK294362 AK295181 AK295493 AK303035
RefSeq transcript (Entrez)NM_001164883 NM_001282597 NM_001282598 NM_001282599 NM_001282600 NM_001320810 NM_004389
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CTNNA2
Alternative Splicing GalleryENSG00000066032
Gene ExpressionCTNNA2 [ NCBI-GEO ]   CTNNA2 [ EBI - ARRAY_EXPRESS ]   CTNNA2 [ SEEK ]   CTNNA2 [ MEM ]
Gene Expression Viewer (FireBrowse)CTNNA2 [ Firebrowse - Broad ]
GenevisibleExpression of CTNNA2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)1496
GTEX Portal (Tissue expression)CTNNA2
Human Protein AtlasENSG00000066032-CTNNA2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CTNNA2
Blocks (Seattle)CTNNA2
Human Protein Atlas [tissue]ENSG00000066032-CTNNA2 [tissue]
HPRD00228
IPIIPI00385055   IPI00743859   IPI00916487   IPI00944563   IPI00944536   IPI00514038   IPI00917211   IPI00917375   IPI01013932   
Protein Interaction databases
BioGRIDCTNNA2
STRING (EMBL)CTNNA2
ZODIACCTNNA2
Ontologies - Pathways
Litterature
PubMed57 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCTNNA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 25 19:17:21 CET 2021

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