Atlas of Genetics and Cytogenetics in Oncology and Haematology

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CXCL14 (chemokine (C-X-C motif) ligand 14)

Identity

Other namesBMAC
BRAK
KEC
KS1
MIP-2g
MIP2G
NJAC
SCYB14
HGNC (Hugo) CXCL14
LocusID (NCBI) 9547
Location 5q31.1
Location_base_pair Starts at 134906371 and ends at 134914969 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CXCL14   10640
Entrez_Gene (NCBI)CXCL14  9547  chemokine (C-X-C motif) ligand 14
Cards
GeneCards (Weizmann)CXCL14
Ensembl (Hinxton)ENSG00000145824 [Gene_View]  chr5:134906371-134914969 [Contig_View]  CXCL14 [Vega]
AceView (NCBI)CXCL14
Genatlas (Paris)CXCL14
SOURCE (Stanford)NM_004887
Genomic and cartography
GoldenPath (UCSC)CXCL14  -  5q31.1   chr5:134906371-134914969 -  5q31.1   [Description]    (hg19-Feb_2009)
EnsemblCXCL14 - 5q31.1 [CytoView]
Mapping of homologs : NCBICXCL14 [Mapview]
OMIM604186   
Gene and transcription
Genbank (Entrez)AB543622 AF073957 AF086340 AF106911 AF144103
RefSeq transcript (SRS)NM_004887
RefSeq transcript (Entrez)NM_004887
RefSeq genomic (SRS)AC_000137 NC_000005 NC_018916 NT_034772 NW_001838952 NW_004078024
RefSeq genomic (Entrez)AC_000137 NC_000005 NC_018916 NT_034772 NW_001838952 NW_004078024
Consensus coding sequences : CCDS (NCBI)CXCL14
Cluster EST : UnigeneHs.483444 [ SRS ] Hs.483444 [ NCBI ]
CGAP (NCI)Hs.483444
Alternative Splicing : Fast-db (Paris)GSHG0025080
Alternative Splicing GalleryENSG00000145824
Gene ExpressionCXCL14 [ NCBI-GEO ]   CXCL14 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95715 (SRS) O95715 (Uniprot)
NextProtO95715
With graphics : InterProO95715
Splice isoforms : SwissVarO95715(Swissvar)
Domaine pattern : Prosite (SRS)SMALL_CYTOKINES_CXC (PS00471)   
Domaine pattern : Prosite (Expaxy)SMALL_CYTOKINES_CXC (PS00471)   
Domains : Interpro (SRS)Chemokine_IL8-like_dom   
Domains : Interpro (EBI)Chemokine_IL8-like_dom   
Related proteins : CluSTrO95715
Domain families : Pfam (SRS)IL8 (PF00048)   
Domain families : Pfam (Sanger)IL8 (PF00048)   
Domain families : Pfam (NCBI)pfam00048   
DMDM9547
Blocks (Seattle)O95715
PDB (SRS)2HDL   
PDB (PDBSum)2HDL   
PDB (IMB)2HDL   
PDB (RSDB)2HDL   
Human Protein AtlasENSG00000145824
HPRD16049
IPIIPI00396257   
Protein Interaction databases
DIP (DOE-UCLA)O95715
IntAct (EBI)O95715
FunCoupENSG00000145824
REACTOMECXCL14
Protein Interaction Database9547
BioGRIDCXCL14
InParanoidO95715
Interologous Interaction database O95715
IntegromeDBCXCL14
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CXCL14
SNP (GeneSNP Utah)CXCL14
SNP : HGBaseCXCL14
Genetic variants : HAPMAPCXCL14
Somatic Mutations in Cancer : COSMICCXCL14 
CONAN: Copy Number AnalysisCXCL14 
Mutations and Diseases : HGMDCXCL14
OMIM604186   
GENETests604186   
Disease Genetic AssociationCXCL14
Huge Navigator CXCL14 [HugePedia]  CXCL14 [HugeCancerGEM]
Genomic VariantsCXCL14  CXCL14 [DGVbeta]
snp3D : Map Gene to Disease9547
General knowledge
Homologs : HomoloGeneCXCL14
Homology/Alignments : Family Browser (UCSC)CXCL14
Phylogenetic Trees/Animal Genes : TreeFamCXCL14
Chemical/Protein Interactions : CTD9547
Chemical/Pharm GKB GenePA35571
Clinical trialCXCL14
Cancer Resource (Charite)ENSG00000145824
Ontology : AmiGOextracellular space  Golgi apparatus  chemotaxis  immune response  signal transduction  cell-cell signaling  chemokine activity  inner ear development  
Ontology : EGO-EBIextracellular space  Golgi apparatus  chemotaxis  immune response  signal transduction  cell-cell signaling  chemokine activity  inner ear development  
Pathways : KEGGCytokine-cytokine receptor interactionLeukocyte transendothelial migration
Other databases
Probes
Litterature
PubMed52 Pubmed reference(s) in Entrez
PubGeneCXCL14
iHOPCXCL14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:40:48 CEST 2013
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