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CYP4Z1 (cytochrome P450, family 4, subfamily Z, polypeptide 1)

Identity

Other namesCYP4A20
HGNC (Hugo) CYP4Z1
LocusID (NCBI) 199974
Atlas_Id 45560
Location 1p33
Location_base_pair Starts at 47533160 and ends at 47583992 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CYP4Z1   20583
Cards
Entrez_Gene (NCBI)CYP4Z1  199974  cytochrome P450, family 4, subfamily Z, polypeptide 1
GeneCards (Weizmann)CYP4Z1
Ensembl hg19 (Hinxton)ENSG00000186160 [Gene_View]  chr1:47533160-47583992 [Contig_View]  CYP4Z1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000186160 [Gene_View]  chr1:47533160-47583992 [Contig_View]  CYP4Z1 [Vega]
ICGC DataPortalENSG00000186160
TCGA cBioPortalCYP4Z1
AceView (NCBI)CYP4Z1
Genatlas (Paris)CYP4Z1
WikiGenes199974
SOURCE (Princeton)CYP4Z1
Genomic and cartography
GoldenPath hg19 (UCSC)CYP4Z1  -     chr1:47533160-47583992 +  1p33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CYP4Z1  -     1p33   [Description]    (hg38-Dec_2013)
EnsemblCYP4Z1 - 1p33 [CytoView hg19]  CYP4Z1 - 1p33 [CytoView hg38]
Mapping of homologs : NCBICYP4Z1 [Mapview hg19]  CYP4Z1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK292175 AY262056 AY358631 BC140382 BC146466
RefSeq transcript (Entrez)NM_178134
RefSeq genomic (Entrez)NC_000001 NC_018912 NG_007967 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)CYP4Z1
Cluster EST : UnigeneHs.176588 [ NCBI ]
CGAP (NCI)Hs.176588
Alternative Splicing : Fast-db (Paris)GSHG0000489
Alternative Splicing GalleryENSG00000186160
Gene ExpressionCYP4Z1 [ NCBI-GEO ]     CYP4Z1 [ SEEK ]   CYP4Z1 [ MEM ]
SOURCE (Princeton)Expression in : [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86W10 (Uniprot)
NextProtQ86W10  [Medical]  [Publications]
With graphics : InterProQ86W10
Splice isoforms : SwissVarQ86W10 (Swissvar)
Catalytic activity : Enzyme1.14.14.1 [ Enzyme-Expasy ]   1.14.14.11.14.14.1 [ IntEnz-EBI ]   1.14.14.1 [ BRENDA ]   1.14.14.1 [ KEGG ]   
Domaine pattern : Prosite (Expaxy)CYTOCHROME_P450 (PS00086)   
Domains : Interpro (EBI)Cyt_P450    Cyt_P450_CS    Cyt_P450_E_grp-I   
Related proteins : CluSTrQ86W10
Domain families : Pfam (Sanger)p450 (PF00067)   
Domain families : Pfam (NCBI)pfam00067   
DMDM Disease mutations199974
Blocks (Seattle)Q86W10
Human Protein AtlasENSG00000186160
Peptide AtlasQ86W10
HPRD13111
IPIIPI00384350   
Protein Interaction databases
DIP (DOE-UCLA)Q86W10
IntAct (EBI)Q86W10
FunCoupENSG00000186160
BioGRIDCYP4Z1
IntegromeDBCYP4Z1
STRING (EMBL)CYP4Z1
Ontologies - Pathways
QuickGOQ86W10
Ontology : AmiGOiron ion binding  endoplasmic reticulum membrane  integral component of membrane  heme binding  oxidation-reduction process  aromatase activity  
Ontology : EGO-EBIiron ion binding  endoplasmic reticulum membrane  integral component of membrane  heme binding  oxidation-reduction process  aromatase activity  
Protein Interaction DatabaseCYP4Z1
DoCM (Curated mutations)CYP4Z1
Wikipedia pathwaysCYP4Z1
Gene fusion - Rearrangements
Gene fusion: TCGA
Polymorphisms : SNP, variants
NCBI Variation ViewerCYP4Z1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CYP4Z1
dbVarCYP4Z1
ClinVarCYP4Z1
1000_GenomesCYP4Z1 
Exome Variant ServerCYP4Z1
SNP (GeneSNP Utah)CYP4Z1
SNP : HGBaseCYP4Z1
Genetic variants : HAPMAPCYP4Z1
Genomic Variants (DGV)CYP4Z1 [DGVbeta]
Mutations
ICGC Data PortalCYP4Z1 
TCGA Data PortalCYP4Z1 
Tumor PortalCYP4Z1
Somatic Mutations in Cancer : COSMICCYP4Z1 
LOVD (Leiden Open Variation Database)genes/CYP4Z1
LOVD (Leiden Open Variation Database)genes/CYP4Z1
LOVD (Leiden Open Variation Database)genes/CYP4Z1
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)1:47533160-47583992
CONAN: Copy Number AnalysisCYP4Z1 
Mutations and Diseases : HGMDCYP4Z1
OMIM
MedgenCYP4Z1
NextProtQ86W10 [Medical]
GENETestsCYP4Z1
Disease Genetic AssociationCYP4Z1
Huge Navigator CYP4Z1 [HugePedia]  CYP4Z1 [HugeCancerGEM]
snp3D : Map Gene to Disease199974
DGIdb (Drug Gene Interaction db)CYP4Z1
BioCentury BCIQCYP4Z1
General knowledge
Homologs : HomoloGeneCYP4Z1
Homology/Alignments : Family Browser (UCSC)CYP4Z1
Phylogenetic Trees/Animal Genes : TreeFamCYP4Z1
Chemical/Protein Interactions : CTD199974
Chemical/Pharm GKB GenePA134941057
Clinical trialCYP4Z1
Cancer Resource (Charite)ENSG00000186160
Other databases
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
CoreMineCYP4Z1
GoPubMedCYP4Z1
iHOPCYP4Z1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated02-2015Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 29 18:23:20 CEST 2015

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