Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA
Taking over the Atlas
Dear Colleagues,
The Atlas, once more, is in great danger, and I will have to proceed to a collective economic lay-off of all the team involved in the Atlas before the begining of April 2015 (a foundation having suddenly withdrawn its commitment to support the Atlas). I ask you herein if any Scientific Society (a Society of Cytogenetics, of Clinical Genetics, of Hematology, or a Cancer Society, or any other...), any University and/or Hospital, any Charity, or any database would be interested in taking over the Atlas, in whole or in part. If taking charge of the whole lot is too big, a consortium of various actors could be the solution (I am myself trying to find partners). Could you please spread the information, contact the relevant authorities, and find partners.
Survival of the Atlas will be critically dependant upon your ability to find solutions (and urgently!).
Kind regards.
Jean-Loup Huret
Donations are also welcome
If each casual visitor gives 3 Euros or Dollars, the Atlas is saved in a week !
If each professional gives 100 Euros or Dollars once a year (now), the Atlas is saved in 2 weeks !
Don't let the Atlas imminent demise
Note: we send fiscal receipts for donations equal or above 50 Euros or Dollars

Donate (in Euros)

Donate (in US Dollars)

CYP4Z1 (cytochrome P450, family 4, subfamily Z, polypeptide 1)


Other namesCYP4A20
HGNC (Hugo) CYP4Z1
LocusID (NCBI) 199974
Location 1p33
Location_base_pair Starts at 47533160 and ends at 47583992 bp from pter ( according to hg19-Feb_2009)

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)CYP4Z1   20583
Entrez_Gene (NCBI)CYP4Z1  199974  cytochrome P450, family 4, subfamily Z, polypeptide 1
GeneCards (Weizmann)CYP4Z1
Ensembl hg19 (Hinxton)ENSG00000186160 [Gene_View]  chr1:47533160-47583992 [Contig_View]  CYP4Z1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000186160 [Gene_View]  chr1:47533160-47583992 [Contig_View]  CYP4Z1 [Vega]
ICGC DataPortalENSG00000186160
AceView (NCBI)CYP4Z1
Genatlas (Paris)CYP4Z1
SOURCE (Princeton)CYP4Z1
Genomic and cartography
GoldenPath hg19 (UCSC)CYP4Z1  -     chr1:47533160-47583992 +  1p33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CYP4Z1  -     1p33   [Description]    (hg38-Dec_2013)
EnsemblCYP4Z1 - 1p33 [CytoView hg19]  CYP4Z1 - 1p33 [CytoView hg38]
Mapping of homologs : NCBICYP4Z1 [Mapview hg19]  CYP4Z1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK292175 AY262056 AY358631 BC140382 BC146466
RefSeq transcript (Entrez)NM_178134
RefSeq genomic (Entrez)NC_000001 NC_018912 NG_007967 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)CYP4Z1
Cluster EST : UnigeneHs.176588 [ NCBI ]
CGAP (NCI)Hs.176588
Alternative Splicing : Fast-db (Paris)GSHG0000489
Alternative Splicing GalleryENSG00000186160
Gene ExpressionCYP4Z1 [ NCBI-GEO ]     CYP4Z1 [ SEEK ]   CYP4Z1 [ MEM ]
SOURCE (Princeton)Expression in : [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86W10 (Uniprot)
NextProtQ86W10  [Medical]
With graphics : InterProQ86W10
Splice isoforms : SwissVarQ86W10 (Swissvar)
Catalytic activity : Enzyme1.14.14.1 [ Enzyme-Expasy ] [ IntEnz-EBI ] [ BRENDA ] [ KEGG ]   
Domaine pattern : Prosite (Expaxy)CYTOCHROME_P450 (PS00086)   
Domains : Interpro (EBI)Cyt_P450    Cyt_P450_CS    Cyt_P450_E_grp-I   
Related proteins : CluSTrQ86W10
Domain families : Pfam (Sanger)p450 (PF00067)   
Domain families : Pfam (NCBI)pfam00067   
DMDM Disease mutations199974
Blocks (Seattle)Q86W10
Human Protein AtlasENSG00000186160
Peptide AtlasQ86W10
Protein Interaction databases
IntAct (EBI)Q86W10
Ontologies - Pathways
Ontology : AmiGOiron ion binding  endoplasmic reticulum membrane  integral component of membrane  heme binding  oxidation-reduction process  aromatase activity  
Ontology : EGO-EBIiron ion binding  endoplasmic reticulum membrane  integral component of membrane  heme binding  oxidation-reduction process  aromatase activity  
Protein Interaction DatabaseCYP4Z1
DoCM (Curated mutations)CYP4Z1
Wikipedia pathwaysCYP4Z1
Gene fusion - rearrangements
Polymorphisms : SNP, variants
NCBI Variation ViewerCYP4Z1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CYP4Z1
Exome Variant ServerCYP4Z1
SNP (GeneSNP Utah)CYP4Z1
Genetic variants : HAPMAPCYP4Z1
Genomic Variants (DGV)CYP4Z1 [DGVbeta]
ICGC Data PortalENSG00000186160 
Somatic Mutations in Cancer : COSMICCYP4Z1 
CONAN: Copy Number AnalysisCYP4Z1 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
DECIPHER (Syndromes)1:47533160-47583992
Mutations and Diseases : HGMDCYP4Z1
NextProtQ86W10 [Medical]
Disease Genetic AssociationCYP4Z1
Huge Navigator CYP4Z1 [HugePedia]  CYP4Z1 [HugeCancerGEM]
snp3D : Map Gene to Disease199974
DGIdb (Drug Gene Interaction db)CYP4Z1
General knowledge
Homologs : HomoloGeneCYP4Z1
Homology/Alignments : Family Browser (UCSC)CYP4Z1
Phylogenetic Trees/Animal Genes : TreeFamCYP4Z1
Chemical/Protein Interactions : CTD199974
Chemical/Pharm GKB GenePA134941057
Clinical trialCYP4Z1
Cancer Resource (Charite)ENSG00000186160
Other databases
PubMed8 Pubmed reference(s) in Entrez
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI


Written09-2002Dessen P, Le Minor S
Updated02-2015Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Mar 28 15:09:55 CET 2015

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us