Atlas of Genetics and Cytogenetics in Oncology and Haematology

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CYP4Z1 (cytochrome P450, family 4, subfamily Z, polypeptide 1)

Identity

Other namesCYP4A20
HGNC (Hugo) CYP4Z1
LocusID (NCBI) 199974
Location 1p33
Location_base_pair Starts at 47533160 and ends at 47583992 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CYP4Z1   20583
Entrez_Gene (NCBI)CYP4Z1  199974  cytochrome P450, family 4, subfamily Z, polypeptide 1
Cards
GeneCards (Weizmann)CYP4Z1
Ensembl (Hinxton)ENSG00000186160 [Gene_View]  chr1:47533160-47583992 [Contig_View]  CYP4Z1 [Vega]
AceView (NCBI)CYP4Z1
Genatlas (Paris)CYP4Z1
SOURCE (Stanford)NM_178134
Genomic and cartography
GoldenPath (UCSC)CYP4Z1  -  1p33   chr1:47533160-47583992 +  1p33   [Description]    (hg19-Feb_2009)
EnsemblCYP4Z1 - 1p33 [CytoView]
Mapping of homologs : NCBICYP4Z1 [Mapview]
Gene and transcription
Genbank (Entrez)AK292175 AY262056 AY358631 BC140382 BC146466
RefSeq transcript (SRS)NM_178134
RefSeq transcript (Entrez)NM_178134
RefSeq genomic (SRS)AC_000133 NC_000001 NC_018912 NG_007967 NT_032977 NW_001838578 NW_004077990
RefSeq genomic (Entrez)AC_000133 NC_000001 NC_018912 NG_007967 NT_032977 NW_001838578 NW_004077990
Consensus coding sequences : CCDS (NCBI)CYP4Z1
Cluster EST : UnigeneHs.176588 [ SRS ] Hs.176588 [ NCBI ]
CGAP (NCI)Hs.176588
Alternative Splicing : Fast-db (Paris)GSHG0000489
Alternative Splicing GalleryENSG00000186160
Gene ExpressionCYP4Z1 [ NCBI-GEO ]   CYP4Z1 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86W10 (SRS) Q86W10 (Uniprot)
NextProtQ86W10
With graphics : InterProQ86W10
Splice isoforms : SwissVarQ86W10(Swissvar)
Domaine pattern : Prosite (SRS)CYTOCHROME_P450 (PS00086)   
Domaine pattern : Prosite (Expaxy)CYTOCHROME_P450 (PS00086)   
Domains : Interpro (SRS)Cyt_P450    Cyt_P450_CS    Cyt_P450_E_grp-I   
Domains : Interpro (EBI)Cyt_P450    Cyt_P450_CS    Cyt_P450_E_grp-I   
Related proteins : CluSTrQ86W10
Domain families : Pfam (SRS)p450 (PF00067)   
Domain families : Pfam (Sanger)p450 (PF00067)   
Domain families : Pfam (NCBI)pfam00067   
DMDM199974
Blocks (Seattle)Q86W10
Human Protein AtlasENSG00000186160
HPRD13111
IPIIPI00384350   
Protein Interaction databases
DIP (DOE-UCLA)Q86W10
IntAct (EBI)Q86W10
FunCoupENSG00000186160
REACTOMECYP4Z1
Protein Interaction Database199974
BioGRIDCYP4Z1
InParanoidQ86W10
Interologous Interaction database Q86W10
IntegromeDBCYP4Z1
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CYP4Z1
SNP (GeneSNP Utah)CYP4Z1
SNP : HGBaseCYP4Z1
Genetic variants : HAPMAPCYP4Z1
Somatic Mutations in Cancer : COSMICCYP4Z1 
CONAN: Copy Number AnalysisCYP4Z1 
Mutations and Diseases : HGMDCYP4Z1
OMIM
GENETests
Disease Genetic AssociationCYP4Z1
Huge Navigator CYP4Z1 [HugePedia]  CYP4Z1 [HugeCancerGEM]
Genomic VariantsCYP4Z1  CYP4Z1 [DGVbeta]
ClinVarCYP4Z1
snp3D : Map Gene to Disease199974
General knowledge
Homologs : HomoloGeneCYP4Z1
Homology/Alignments : Family Browser (UCSC)CYP4Z1
Phylogenetic Trees/Animal Genes : TreeFamCYP4Z1
Catalytic activity : Enzyme1.14.14.1 [ Enzyme-Expasy ]   1.14.14.1 [ Enzyme-SRS ]   1.14.14.1 [ IntEnz-EBI ]   1.14.14.1 [ BRENDA ]   1.14.14.1 [ KEGG ]   
Chemical/Protein Interactions : CTD199974
Chemical/Pharm GKB GenePA134941057
Clinical trialCYP4Z1
Cancer Resource (Charite)ENSG00000186160
Ontology : AmiGOiron ion binding  endoplasmic reticulum membrane  electron carrier activity  integral to membrane  heme binding  aromatase activity  
Ontology : EGO-EBIiron ion binding  endoplasmic reticulum membrane  electron carrier activity  integral to membrane  heme binding  aromatase activity  
Other databases
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
PubGeneCYP4Z1
iHOPCYP4Z1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:30:55 CEST 2013
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