Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CYYR1-AS1 (CYYR1 antisense RNA 1)

Identity

Alias (NCBI)-
HGNC (Hugo) CYYR1-AS1
HGNC Previous namecysteine/tyrosine-rich 1 antisense RNA 1
LocusID (NCBI) 100996571
Atlas_Id 62276
Location 21q21.3  [Link to chromosome band 21q21]
Location_base_pair Starts at 26393635 and ends at 26518592 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CYYR1-AS1   39560
Cards
Entrez_Gene (NCBI)CYYR1-AS1  100996571  CYYR1 antisense RNA 1
Aliases
GeneCards (Weizmann)CYYR1-AS1
Ensembl hg19 (Hinxton)ENSG00000197934 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197934 [Gene_View]  ENSG00000197934 [Sequence]  chr21:26393635-26518592 [Contig_View]  CYYR1-AS1 [Vega]
ICGC DataPortalENSG00000197934
TCGA cBioPortalCYYR1-AS1
AceView (NCBI)CYYR1-AS1
Genatlas (Paris)CYYR1-AS1
WikiGenes100996571
SOURCE (Princeton)CYYR1-AS1
Genetics Home Reference (NIH)CYYR1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CYYR1-AS1  -     chr21:26393635-26518592 +  21q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CYYR1-AS1  -     21q21.3   [Description]    (hg19-Feb_2009)
GoldenPathCYYR1-AS1 - 21q21.3 [CytoView hg19]  CYYR1-AS1 - 21q21.3 [CytoView hg38]
ImmunoBaseENSG00000197934
genome Data Viewer NCBICYYR1-AS1 [Mapview hg19]  
OMIM616021   
Gene and transcription
Genbank (Entrez)AK125338 BX114294 JF693915
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CYYR1-AS1
Alternative Splicing GalleryENSG00000197934
Gene ExpressionCYYR1-AS1 [ NCBI-GEO ]   CYYR1-AS1 [ EBI - ARRAY_EXPRESS ]   CYYR1-AS1 [ SEEK ]   CYYR1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CYYR1-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of CYYR1-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100996571
GTEX Portal (Tissue expression)CYYR1-AS1
Human Protein AtlasENSG00000197934-CYYR1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CYYR1-AS1
DMDM Disease mutations100996571
Blocks (Seattle)CYYR1-AS1
Human Protein Atlas [tissue]ENSG00000197934-CYYR1-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000197934
BioGRIDCYYR1-AS1
STRING (EMBL)CYYR1-AS1
ZODIACCYYR1-AS1
Ontologies - Pathways
Huge Navigator CYYR1-AS1 [HugePedia]
snp3D : Map Gene to Disease100996571
BioCentury BCIQCYYR1-AS1
ClinGenCYYR1-AS1
Clinical trials, drugs, therapy
Protein Interactions : CTD100996571
Clinical trialCYYR1-AS1
Miscellaneous
canSAR (ICR)CYYR1-AS1 (select the gene name)
HarmonizomeCYYR1-AS1
DataMed IndexCYYR1-AS1
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCYYR1-AS1
EVEXCYYR1-AS1
GoPubMedCYYR1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 15:52:50 CEST 2020

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