Atlas of Genetics and Cytogenetics in Oncology and Haematology

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DHRS7B (dehydrogenase/reductase 7B)

Identity

Alias_namesdehydrogenase/reductase (SDR family) member 7B
Alias_symbol (synonym)DKFZp566O084
MGC8916
CGI-93
SDR32C1
Other alias
HGNC (Hugo) DHRS7B
LocusID (NCBI) 25979
Atlas_Id 62472
Location 17p11.2  [Link to chromosome band 17p11]
Location_base_pair Starts at 21166187 and ends at 21192031 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DHRS7B (17p11.2) / PKHD1 (6p12.3)P3H2 (3q28) / DHRS7B (17p11.2)WBP5 () / DHRS7B (17p11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)DHRS7B   24547
Cards
Entrez_Gene (NCBI)DHRS7B  25979  dehydrogenase/reductase 7B
AliasesCGI-93; SDR32C1
GeneCards (Weizmann)DHRS7B
Ensembl hg19 (Hinxton)ENSG00000109016 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000109016 [Gene_View]  ENSG00000109016 [Sequence]  chr17:21166187-21192031 [Contig_View]  DHRS7B [Vega]
ICGC DataPortalENSG00000109016
TCGA cBioPortalDHRS7B
AceView (NCBI)DHRS7B
Genatlas (Paris)DHRS7B
WikiGenes25979
SOURCE (Princeton)DHRS7B
Genetics Home Reference (NIH)DHRS7B
Genomic and cartography
GoldenPath hg38 (UCSC)DHRS7B  -     chr17:21166187-21192031 +  17p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DHRS7B  -     17p11.2   [Description]    (hg19-Feb_2009)
GoldenPathDHRS7B - 17p11.2 [CytoView hg19]  DHRS7B - 17p11.2 [CytoView hg38]
ImmunoBaseENSG00000109016
Mapping of homologs : NCBIDHRS7B [Mapview hg19]  DHRS7B [Mapview hg38]
OMIM616160   
Gene and transcription
Genbank (Entrez)AF151851 AI018764 AK124055 AK309867 AL117567
RefSeq transcript (Entrez)NM_001330159 NM_015510
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DHRS7B
Cluster EST : UnigeneHs.386989 [ NCBI ]
CGAP (NCI)Hs.386989
Alternative Splicing GalleryENSG00000109016
Gene ExpressionDHRS7B [ NCBI-GEO ]   DHRS7B [ EBI - ARRAY_EXPRESS ]   DHRS7B [ SEEK ]   DHRS7B [ MEM ]
Gene Expression Viewer (FireBrowse)DHRS7B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25979
GTEX Portal (Tissue expression)DHRS7B
Human Protein AtlasENSG00000109016-DHRS7B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6IAN0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6IAN0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6IAN0
Splice isoforms : SwissVarQ6IAN0
PhosPhoSitePlusQ6IAN0
Domaine pattern : Prosite (Expaxy)ADH_SHORT (PS00061)   
Domains : Interpro (EBI)NAD(P)-bd_dom_sf    Sc_DH/Rdtase_CS    SDR_fam   
Domain families : Pfam (Sanger)adh_short (PF00106)   
Domain families : Pfam (NCBI)pfam00106   
Conserved Domain (NCBI)DHRS7B
DMDM Disease mutations25979
Blocks (Seattle)DHRS7B
SuperfamilyQ6IAN0
Human Protein Atlas [tissue]ENSG00000109016-DHRS7B [tissue]
Peptide AtlasQ6IAN0
HPRD13215
IPIIPI00550165   IPI00871975   
Protein Interaction databases
DIP (DOE-UCLA)Q6IAN0
IntAct (EBI)Q6IAN0
FunCoupENSG00000109016
BioGRIDDHRS7B
STRING (EMBL)DHRS7B
ZODIACDHRS7B
Ontologies - Pathways
QuickGOQ6IAN0
Ontology : AmiGOmolecular_function  endoplasmic reticulum membrane  biological_process  ether lipid biosynthetic process  membrane  integral component of membrane  oxidoreductase activity  neutrophil differentiation  oxidation-reduction process  
Ontology : EGO-EBImolecular_function  endoplasmic reticulum membrane  biological_process  ether lipid biosynthetic process  membrane  integral component of membrane  oxidoreductase activity  neutrophil differentiation  oxidation-reduction process  
NDEx NetworkDHRS7B
Atlas of Cancer Signalling NetworkDHRS7B
Wikipedia pathwaysDHRS7B
Orthology - Evolution
OrthoDB25979
GeneTree (enSembl)ENSG00000109016
Phylogenetic Trees/Animal Genes : TreeFamDHRS7B
HOGENOMQ6IAN0
Homologs : HomoloGeneDHRS7B
Homology/Alignments : Family Browser (UCSC)DHRS7B
Gene fusions - Rearrangements
Fusion : QuiverDHRS7B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDHRS7B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DHRS7B
dbVarDHRS7B
ClinVarDHRS7B
1000_GenomesDHRS7B 
Exome Variant ServerDHRS7B
ExAC (Exome Aggregation Consortium)ENSG00000109016
GNOMAD BrowserENSG00000109016
Varsome BrowserDHRS7B
Genetic variants : HAPMAP25979
Genomic Variants (DGV)DHRS7B [DGVbeta]
DECIPHERDHRS7B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDHRS7B 
Mutations
ICGC Data PortalDHRS7B 
TCGA Data PortalDHRS7B 
Broad Tumor PortalDHRS7B
OASIS PortalDHRS7B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDHRS7B  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DDHRS7B
Mutations and Diseases : HGMDDHRS7B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DHRS7B
DgiDB (Drug Gene Interaction Database)DHRS7B
DoCM (Curated mutations)DHRS7B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DHRS7B (select a term)
intoGenDHRS7B
Cancer3DDHRS7B(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616160   
Orphanet
DisGeNETDHRS7B
MedgenDHRS7B
Genetic Testing Registry DHRS7B
NextProtQ6IAN0 [Medical]
TSGene25979
GENETestsDHRS7B
Target ValidationDHRS7B
Huge Navigator DHRS7B [HugePedia]
snp3D : Map Gene to Disease25979
BioCentury BCIQDHRS7B
ClinGenDHRS7B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD25979
Chemical/Pharm GKB GenePA142671976
Clinical trialDHRS7B
Miscellaneous
canSAR (ICR)DHRS7B (select the gene name)
DataMed IndexDHRS7B
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDHRS7B
EVEXDHRS7B
GoPubMedDHRS7B
iHOPDHRS7B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:25:43 CEST 2019
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