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DMWD (DM1 locus, WD repeat containing)

Identity

Alias_namesdystrophia myotonica-containing WD repeat motif
Alias_symbol (synonym)DMR-N9
gene59
D19S593E
Other aliasDMRN9
HGNC (Hugo) DMWD
LocusID (NCBI) 1762
Atlas_Id 62538
Location 19q13.32  [Link to chromosome band 19q13]
Location_base_pair Starts at 45783006 and ends at 45792802 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
RSPH6A (19q13.32) / DMWD (19q13.32)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)DMWD   2936
Cards
Entrez_Gene (NCBI)DMWD  1762  DM1 locus, WD repeat containing
AliasesD19S593E; DMR-N9; DMRN9; gene59
GeneCards (Weizmann)DMWD
Ensembl hg19 (Hinxton)ENSG00000185800 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000185800 [Gene_View]  ENSG00000185800 [Sequence]  chr19:45783006-45792802 [Contig_View]  DMWD [Vega]
ICGC DataPortalENSG00000185800
TCGA cBioPortalDMWD
AceView (NCBI)DMWD
Genatlas (Paris)DMWD
WikiGenes1762
SOURCE (Princeton)DMWD
Genetics Home Reference (NIH)DMWD
Genomic and cartography
GoldenPath hg38 (UCSC)DMWD  -     chr19:45783006-45792802 -  19q13.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DMWD  -     19q13.32   [Description]    (hg19-Feb_2009)
GoldenPathDMWD - 19q13.32 [CytoView hg19]  DMWD - 19q13.32 [CytoView hg38]
ImmunoBaseENSG00000185800
Mapping of homologs : NCBIDMWD [Mapview hg19]  DMWD [Mapview hg38]
OMIM609857   
Gene and transcription
Genbank (Entrez)AK309497 BC019266 BC041034 BG106514 BM922103
RefSeq transcript (Entrez)NM_004943
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DMWD
Cluster EST : UnigeneHs.515474 [ NCBI ]
CGAP (NCI)Hs.515474
Alternative Splicing GalleryENSG00000185800
Gene ExpressionDMWD [ NCBI-GEO ]   DMWD [ EBI - ARRAY_EXPRESS ]   DMWD [ SEEK ]   DMWD [ MEM ]
Gene Expression Viewer (FireBrowse)DMWD [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)1762
GTEX Portal (Tissue expression)DMWD
Human Protein AtlasENSG00000185800-DMWD [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ09019   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ09019  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ09019
Splice isoforms : SwissVarQ09019
PhosPhoSitePlusQ09019
Domaine pattern : Prosite (Expaxy)WD_REPEATS_2 (PS50082)    WD_REPEATS_REGION (PS50294)   
Domains : Interpro (EBI)WD40/YVTN_repeat-like_dom_sf    WD40_repeat    WD40_repeat_dom    WD40_repeat_dom_sf   
Domain families : Pfam (Sanger)WD40 (PF00400)   
Domain families : Pfam (NCBI)pfam00400   
Domain families : Smart (EMBL)WD40 (SM00320)  
Conserved Domain (NCBI)DMWD
DMDM Disease mutations1762
Blocks (Seattle)DMWD
SuperfamilyQ09019
Human Protein Atlas [tissue]ENSG00000185800-DMWD [tissue]
Peptide AtlasQ09019
IPIIPI00796018   IPI00975729   IPI00455397   IPI01010506   
Protein Interaction databases
DIP (DOE-UCLA)Q09019
IntAct (EBI)Q09019
FunCoupENSG00000185800
BioGRIDDMWD
STRING (EMBL)DMWD
ZODIACDMWD
Ontologies - Pathways
QuickGOQ09019
Ontology : AmiGOmolecular_function  cellular_component  nucleus  dendrite  perikaryon  
Ontology : EGO-EBImolecular_function  cellular_component  nucleus  dendrite  perikaryon  
NDEx NetworkDMWD
Atlas of Cancer Signalling NetworkDMWD
Wikipedia pathwaysDMWD
Orthology - Evolution
OrthoDB1762
GeneTree (enSembl)ENSG00000185800
Phylogenetic Trees/Animal Genes : TreeFamDMWD
HOGENOMQ09019
Homologs : HomoloGeneDMWD
Homology/Alignments : Family Browser (UCSC)DMWD
Gene fusions - Rearrangements
Fusion : QuiverDMWD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDMWD [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DMWD
dbVarDMWD
ClinVarDMWD
1000_GenomesDMWD 
Exome Variant ServerDMWD
ExAC (Exome Aggregation Consortium)ENSG00000185800
GNOMAD BrowserENSG00000185800
Varsome BrowserDMWD
Genetic variants : HAPMAP1762
Genomic Variants (DGV)DMWD [DGVbeta]
DECIPHERDMWD [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDMWD 
Mutations
ICGC Data PortalDMWD 
TCGA Data PortalDMWD 
Broad Tumor PortalDMWD
OASIS PortalDMWD [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDMWD  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DDMWD
Mutations and Diseases : HGMDDMWD
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DMWD
DgiDB (Drug Gene Interaction Database)DMWD
DoCM (Curated mutations)DMWD (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DMWD (select a term)
intoGenDMWD
Cancer3DDMWD(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609857   
Orphanet
DisGeNETDMWD
MedgenDMWD
Genetic Testing Registry DMWD
NextProtQ09019 [Medical]
TSGene1762
GENETestsDMWD
Target ValidationDMWD
Huge Navigator DMWD [HugePedia]
snp3D : Map Gene to Disease1762
BioCentury BCIQDMWD
ClinGenDMWD
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD1762
Chemical/Pharm GKB GenePA27390
Clinical trialDMWD
Miscellaneous
canSAR (ICR)DMWD (select the gene name)
DataMed IndexDMWD
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDMWD
EVEXDMWD
GoPubMedDMWD
iHOPDMWD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:25:54 CEST 2019
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