Atlas of Genetics and Cytogenetics in Oncology and Haematology

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DNAH10 (dynein axonemal heavy chain 10)

Identity

Alias_namesdynein, axonemal, heavy polypeptide 10
Alias_symbol (synonym)FLJ43808
Other alias-
HGNC (Hugo) DNAH10
LocusID (NCBI) 196385
Atlas_Id 62544
Location 12q24.31  [Link to chromosome band 12q24]
Location_base_pair Starts at 123762495 and ends at 123935720 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DNAH10 (12q24.31) / DDX42 (17q23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)DNAH10   2941
Cards
Entrez_Gene (NCBI)DNAH10  196385  dynein axonemal heavy chain 10
Aliases
GeneCards (Weizmann)DNAH10
Ensembl hg19 (Hinxton)ENSG00000197653 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197653 [Gene_View]  ENSG00000197653 [Sequence]  chr12:123762495-123935720 [Contig_View]  DNAH10 [Vega]
ICGC DataPortalENSG00000197653
TCGA cBioPortalDNAH10
AceView (NCBI)DNAH10
Genatlas (Paris)DNAH10
WikiGenes196385
SOURCE (Princeton)DNAH10
Genetics Home Reference (NIH)DNAH10
Genomic and cartography
GoldenPath hg38 (UCSC)DNAH10  -     chr12:123762495-123935720 +  12q24.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DNAH10  -     12q24.31   [Description]    (hg19-Feb_2009)
GoldenPathDNAH10 - 12q24.31 [CytoView hg19]  DNAH10 - 12q24.31 [CytoView hg38]
ImmunoBaseENSG00000197653
Mapping of homologs : NCBIDNAH10 [Mapview hg19]  DNAH10 [Mapview hg38]
OMIM605884   
Gene and transcription
Genbank (Entrez)AB095937 AB290168 AI240003 AJ132089 AK091526
RefSeq transcript (Entrez)NM_207437
RefSeq genomic (Entrez)NC_000012 NT_187590
Consensus coding sequences : CCDS (NCBI)DNAH10
Cluster EST : UnigeneHs.622654 [ NCBI ]
CGAP (NCI)Hs.622654
Alternative Splicing GalleryENSG00000197653
Gene ExpressionDNAH10 [ NCBI-GEO ]   DNAH10 [ EBI - ARRAY_EXPRESS ]   DNAH10 [ SEEK ]   DNAH10 [ MEM ]
Gene Expression Viewer (FireBrowse)DNAH10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)196385
GTEX Portal (Tissue expression)DNAH10
Human Protein AtlasENSG00000197653-DNAH10 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IVF4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IVF4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IVF4
Splice isoforms : SwissVarQ8IVF4
PhosPhoSitePlusQ8IVF4
Domains : Interpro (EBI)AAA+_ATPase    AAA_6    ATPase_dyneun-rel_AAA    DHC_D5    DHC_fam    Dynein_HC_stalk    Dynein_heavy_chain_D4_dom    Dynein_heavy_dom    Dynein_heavy_dom-1    Dynein_heavy_dom-2    P-loop_NTPase   
Domain families : Pfam (Sanger)AAA_5 (PF07728)    AAA_6 (PF12774)    AAA_8 (PF12780)    AAA_9 (PF12781)    DHC_N1 (PF08385)    DHC_N2 (PF08393)    Dynein_heavy (PF03028)    MT (PF12777)   
Domain families : Pfam (NCBI)pfam07728    pfam12774    pfam12780    pfam12781    pfam08385    pfam08393    pfam03028    pfam12777   
Domain families : Smart (EMBL)AAA (SM00382)  
Conserved Domain (NCBI)DNAH10
DMDM Disease mutations196385
Blocks (Seattle)DNAH10
SuperfamilyQ8IVF4
Human Protein Atlas [tissue]ENSG00000197653-DNAH10 [tissue]
Peptide AtlasQ8IVF4
HPRD13473
IPIIPI00784869   IPI00401809   IPI01012632   IPI01012218   
Protein Interaction databases
DIP (DOE-UCLA)Q8IVF4
IntAct (EBI)Q8IVF4
FunCoupENSG00000197653
BioGRIDDNAH10
STRING (EMBL)DNAH10
ZODIACDNAH10
Ontologies - Pathways
QuickGOQ8IVF4
Ontology : AmiGOATP binding  microtubule  axoneme  microtubule-based movement  ATP-dependent microtubule motor activity, minus-end-directed  dynein complex  dynein light chain binding  dynein intermediate chain binding  dynein light intermediate chain binding  
Ontology : EGO-EBIATP binding  microtubule  axoneme  microtubule-based movement  ATP-dependent microtubule motor activity, minus-end-directed  dynein complex  dynein light chain binding  dynein intermediate chain binding  dynein light intermediate chain binding  
NDEx NetworkDNAH10
Atlas of Cancer Signalling NetworkDNAH10
Wikipedia pathwaysDNAH10
Orthology - Evolution
OrthoDB196385
GeneTree (enSembl)ENSG00000197653
Phylogenetic Trees/Animal Genes : TreeFamDNAH10
HOGENOMQ8IVF4
Homologs : HomoloGeneDNAH10
Homology/Alignments : Family Browser (UCSC)DNAH10
Gene fusions - Rearrangements
Fusion : QuiverDNAH10
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDNAH10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DNAH10
dbVarDNAH10
ClinVarDNAH10
1000_GenomesDNAH10 
Exome Variant ServerDNAH10
ExAC (Exome Aggregation Consortium)ENSG00000197653
GNOMAD BrowserENSG00000197653
Varsome BrowserDNAH10
Genetic variants : HAPMAP196385
Genomic Variants (DGV)DNAH10 [DGVbeta]
DECIPHERDNAH10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDNAH10 
Mutations
ICGC Data PortalDNAH10 
TCGA Data PortalDNAH10 
Broad Tumor PortalDNAH10
OASIS PortalDNAH10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDNAH10  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DDNAH10
Mutations and Diseases : HGMDDNAH10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DNAH10
DgiDB (Drug Gene Interaction Database)DNAH10
DoCM (Curated mutations)DNAH10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DNAH10 (select a term)
intoGenDNAH10
Cancer3DDNAH10(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605884   
Orphanet
DisGeNETDNAH10
MedgenDNAH10
Genetic Testing Registry DNAH10
NextProtQ8IVF4 [Medical]
TSGene196385
GENETestsDNAH10
Target ValidationDNAH10
Huge Navigator DNAH10 [HugePedia]
snp3D : Map Gene to Disease196385
BioCentury BCIQDNAH10
ClinGenDNAH10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD196385
Chemical/Pharm GKB GenePA27395
Clinical trialDNAH10
Miscellaneous
canSAR (ICR)DNAH10 (select the gene name)
DataMed IndexDNAH10
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDNAH10
EVEXDNAH10
GoPubMedDNAH10
iHOPDNAH10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:25:56 CEST 2019
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