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DNAJC7 (DnaJ (Hsp40) homolog, subfamily C, member 7)

Identity

Other namesDJ11
DJC7
TPR2
TTC2
HGNC (Hugo) DNAJC7
LocusID (NCBI) 7266
Location 17q21.2
Location_base_pair Starts at 40128439 and ends at 40169183 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)DNAJC7   12392
Entrez_Gene (NCBI)DNAJC7  7266  DnaJ (Hsp40) homolog, subfamily C, member 7
Cards
GeneCards (Weizmann)DNAJC7
Ensembl (Hinxton)ENSG00000168259 [Gene_View]  chr17:40128439-40169183 [Contig_View]  DNAJC7 [Vega]
AceView (NCBI)DNAJC7
Genatlas (Paris)DNAJC7
SOURCE (Stanford)NM_001144766 NM_003315
Genomic and cartography
GoldenPath (UCSC)DNAJC7  -  17q21.2   chr17:40128439-40169183 -  17q21.2   [Description]    (hg19-Feb_2009)
EnsemblDNAJC7 - 17q21.2 [CytoView]
Mapping of homologs : NCBIDNAJC7 [Mapview]
OMIM601964   
Gene and transcription
Genbank (Entrez)AB209834 AK291047 AK296602 AK298860 AK308016
RefSeq transcript (SRS)NM_001144766 NM_003315
RefSeq transcript (Entrez)NM_001144766 NM_003315
RefSeq genomic (SRS)AC_000149 NC_000017 NC_018928 NT_010783 NW_001838436 NW_003571052 NW_004078092
RefSeq genomic (Entrez)AC_000149 NC_000017 NC_018928 NT_010783 NW_001838436 NW_003571052 NW_004078092
Consensus coding sequences : CCDS (NCBI)DNAJC7
Cluster EST : UnigeneHs.500156 [ SRS ] Hs.500156 [ NCBI ]
CGAP (NCI)Hs.500156
Alternative Splicing : Fast-db (Paris)GSHG0013409
Alternative Splicing GalleryENSG00000168259
Gene ExpressionDNAJC7 [ NCBI-GEO ]   DNAJC7 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ99615 (SRS) Q99615 (Uniprot)
NextProtQ99615
With graphics : InterProQ99615
Splice isoforms : SwissVarQ99615(Swissvar)
Domaine pattern : Prosite (SRS)DNAJ_1 (PS00636)    DNAJ_2 (PS50076)    TPR (PS50005)    TPR_REGION (PS50293)   
Domaine pattern : Prosite (Expaxy)DNAJ_1 (PS00636)    DNAJ_2 (PS50076)    TPR (PS50005)    TPR_REGION (PS50293)   
Domains : Interpro (SRS)DnaJ_N    Elongated_TPR_rpt_dom    Hsp_DnaJ    TPR-1    TPR-contain_dom    TPR-like_helical    TPR_repeat   
Domains : Interpro (EBI)DnaJ_N    Elongated_TPR_rpt_dom    Hsp_DnaJ    TPR-1    TPR-contain_dom    TPR-like_helical    TPR_repeat   
Related proteins : CluSTrQ99615
Domain families : Pfam (SRS)DnaJ (PF00226)    TPR_1 (PF00515)   
Domain families : Pfam (Sanger)DnaJ (PF00226)    TPR_1 (PF00515)   
Domain families : Pfam (NCBI)pfam00226    pfam00515   
Domain families : Smart (EMBL)DnaJ (SM00271)  TPR (SM00028)  
DMDM7266
Blocks (Seattle)Q99615
Human Protein AtlasENSG00000168259
IPIIPI00329629   IPI00794610   
Protein Interaction databases
DIP (DOE-UCLA)Q99615
IntAct (EBI)Q99615
FunCoupENSG00000168259
REACTOMEDNAJC7
Protein Interaction Database7266
BioGRIDDNAJC7
InParanoidQ99615
Interologous Interaction database Q99615
IntegromeDBDNAJC7
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)DNAJC7
SNP (GeneSNP Utah)DNAJC7
SNP : HGBaseDNAJC7
Genetic variants : HAPMAPDNAJC7
Somatic Mutations in Cancer : COSMICDNAJC7 
CONAN: Copy Number AnalysisDNAJC7 
Mutations and Diseases : HGMDDNAJC7
OMIM601964   
GENETests601964   
Disease Genetic AssociationDNAJC7
Huge Navigator DNAJC7 [HugePedia]  DNAJC7 [HugeCancerGEM]
Genomic VariantsDNAJC7  DNAJC7 [DGVbeta]
snp3D : Map Gene to Disease7266
General knowledge
Homologs : HomoloGeneDNAJC7
Homology/Alignments : Family Browser (UCSC)DNAJC7
Phylogenetic Trees/Animal Genes : TreeFamDNAJC7
Chemical/Protein Interactions : CTD7266
Chemical/Pharm GKB GenePA27424
Clinical trialDNAJC7
Cancer Resource (Charite)ENSG00000168259
Ontology : AmiGOprotein binding  nucleus  nucleolus  cytoplasm  cytoskeleton  protein folding  heat shock protein binding  unfolded protein binding  chaperone cofactor-dependent protein refolding  
Ontology : EGO-EBIprotein binding  nucleus  nucleolus  cytoplasm  cytoskeleton  protein folding  heat shock protein binding  unfolded protein binding  chaperone cofactor-dependent protein refolding  
Other databases
Probes
Litterature
PubMed32 Pubmed reference(s) in Entrez
PubGeneDNAJC7
iHOPDNAJC7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:48:02 CEST 2013
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