Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

DOP1A (DOP1 leucine zipper like protein A)

Identity

Alias_namesKIAA1117
DOPEY1
KIAA1117
dopey family member 1
Alias_symbol (synonym)dJ202D23.2
Other aliasDOP1
HGNC (Hugo) DOP1A
LocusID (NCBI) 23033
Atlas_Id 57430
Location 6q14.1  [Link to chromosome band 6q14]
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)DOP1A   21194
Cards
Entrez_Gene (NCBI)DOP1A  23033  DOP1 leucine zipper like protein A
AliasesDOP1; DOPEY1; KIAA1117; dJ202D23.2
GeneCards (Weizmann)DOP1A
Ensembl hg19 (Hinxton)ENSG00000083097 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000083097 [Gene_View]  ENSG00000083097 [Sequence]  - [Contig_View]  DOP1A [Vega]
ICGC DataPortalENSG00000083097
TCGA cBioPortalDOP1A
AceView (NCBI)DOP1A
Genatlas (Paris)DOP1A
WikiGenes23033
SOURCE (Princeton)DOP1A
Genetics Home Reference (NIH)DOP1A
Genomic and cartography
GoldenPath hg38 (UCSC)DOP1A  -  
GoldenPath hg19 (UCSC)DOP1A  -  
GoldenPathDOP1A - [CytoView hg19]  DOP1A - [CytoView hg38]
ImmunoBaseENSG00000083097
Mapping of homologs : NCBIDOP1A [Mapview hg19]  DOP1A [Mapview hg38]
OMIM616823   
Gene and transcription
Genbank (Entrez)AB029040 AK027030 AK092929 AK094766 AL050080
RefSeq transcript (Entrez)NM_001199942 NM_015018
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DOP1A
Cluster EST : UnigeneHs.708998 [ NCBI ]
CGAP (NCI)Hs.708998
Alternative Splicing GalleryENSG00000083097
Gene ExpressionDOP1A [ NCBI-GEO ]   DOP1A [ EBI - ARRAY_EXPRESS ]   DOP1A [ SEEK ]   DOP1A [ MEM ]
Gene Expression Viewer (FireBrowse)DOP1A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23033
GTEX Portal (Tissue expression)DOP1A
Human Protein AtlasENSG00000083097-DOP1A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5JWR5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5JWR5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5JWR5
Splice isoforms : SwissVarQ5JWR5
PhosPhoSitePlusQ5JWR5
Domains : Interpro (EBI)Dopey_N   
Domain families : Pfam (Sanger)Dopey_N (PF04118)   
Domain families : Pfam (NCBI)pfam04118   
Conserved Domain (NCBI)DOP1A
DMDM Disease mutations23033
Blocks (Seattle)DOP1A
SuperfamilyQ5JWR5
Human Protein Atlas [tissue]ENSG00000083097-DOP1A [tissue]
Peptide AtlasQ5JWR5
IPIIPI00413794   IPI01010371   IPI00982129   IPI00868974   IPI00010903   
Protein Interaction databases
DIP (DOE-UCLA)Q5JWR5
IntAct (EBI)Q5JWR5
FunCoupENSG00000083097
BioGRIDDOP1A
STRING (EMBL)DOP1A
ZODIACDOP1A
Ontologies - Pathways
QuickGOQ5JWR5
Ontology : AmiGOGolgi membrane  endosome  trans-Golgi network  cytosol  Golgi to endosome transport  protein transport  
Ontology : EGO-EBIGolgi membrane  endosome  trans-Golgi network  cytosol  Golgi to endosome transport  protein transport  
NDEx NetworkDOP1A
Atlas of Cancer Signalling NetworkDOP1A
Wikipedia pathwaysDOP1A
Orthology - Evolution
OrthoDB23033
GeneTree (enSembl)ENSG00000083097
Phylogenetic Trees/Animal Genes : TreeFamDOP1A
HOGENOMQ5JWR5
Homologs : HomoloGeneDOP1A
Homology/Alignments : Family Browser (UCSC)DOP1A
Gene fusions - Rearrangements
Fusion : QuiverDOP1A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDOP1A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DOP1A
dbVarDOP1A
ClinVarDOP1A
1000_GenomesDOP1A 
Exome Variant ServerDOP1A
ExAC (Exome Aggregation Consortium)ENSG00000083097
GNOMAD BrowserENSG00000083097
Varsome BrowserDOP1A
Genetic variants : HAPMAP23033
Genomic Variants (DGV)DOP1A [DGVbeta]
DECIPHERDOP1A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDOP1A 
Mutations
ICGC Data PortalDOP1A 
TCGA Data PortalDOP1A 
Broad Tumor PortalDOP1A
OASIS PortalDOP1A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDOP1A  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DDOP1A
Mutations and Diseases : HGMDDOP1A
BioMutasearch DOP1A
DgiDB (Drug Gene Interaction Database)DOP1A
DoCM (Curated mutations)DOP1A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DOP1A (select a term)
intoGenDOP1A
Cancer3DDOP1A(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616823   
Orphanet
DisGeNETDOP1A
MedgenDOP1A
Genetic Testing Registry DOP1A
NextProtQ5JWR5 [Medical]
TSGene23033
GENETestsDOP1A
Target ValidationDOP1A
Huge Navigator DOP1A [HugePedia]
snp3D : Map Gene to Disease23033
BioCentury BCIQDOP1A
ClinGenDOP1A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23033
Chemical/Pharm GKB GenePA134924787
Clinical trialDOP1A
Miscellaneous
canSAR (ICR)DOP1A (select the gene name)
DataMed IndexDOP1A
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDOP1A
EVEXDOP1A
GoPubMedDOP1A
iHOPDOP1A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Nov 13 17:40:55 CET 2019
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.