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DPH6-DT (DPH6 divergent transcript)

Identity

Other aliasATPBD4-AS1
DPH6-AS1
HGNC (Hugo) DPH6-DT
LocusID (NCBI) 100507466
Atlas_Id 80482
Location 15q14  [Link to chromosome band 15q14]
Location_base_pair Starts at 35546195 and ends at 35859001 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)DPH6-DT   44147
Cards
Entrez_Gene (NCBI)DPH6-DT  100507466  DPH6 divergent transcript
AliasesATPBD4-AS1; DPH6-AS1
GeneCards (Weizmann)DPH6-DT
Ensembl hg19 (Hinxton)ENSG00000248079 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248079 [Gene_View]  ENSG00000248079 [Sequence]  chr15:35546195-35859001 [Contig_View]  DPH6-DT [Vega]
ICGC DataPortalENSG00000248079
TCGA cBioPortalDPH6-DT
AceView (NCBI)DPH6-DT
Genatlas (Paris)DPH6-DT
WikiGenes100507466
SOURCE (Princeton)DPH6-DT
Genetics Home Reference (NIH)DPH6-DT
Genomic and cartography
GoldenPath hg38 (UCSC)DPH6-DT  -     chr15:35546195-35859001 +  15q14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DPH6-DT  -     15q14   [Description]    (hg19-Feb_2009)
GoldenPathDPH6-DT - 15q14 [CytoView hg19]  DPH6-DT - 15q14 [CytoView hg38]
ImmunoBaseENSG00000248079
Mapping of homologs : NCBIDPH6-DT [Mapview hg19]  DPH6-DT [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC025664
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DPH6-DT
Cluster EST : UnigeneHs.536420 [ NCBI ]
CGAP (NCI)Hs.536420
Alternative Splicing GalleryENSG00000248079
Gene ExpressionDPH6-DT [ NCBI-GEO ]   DPH6-DT [ EBI - ARRAY_EXPRESS ]   DPH6-DT [ SEEK ]   DPH6-DT [ MEM ]
Gene Expression Viewer (FireBrowse)DPH6-DT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507466
GTEX Portal (Tissue expression)DPH6-DT
Human Protein AtlasENSG00000248079-DPH6-DT [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DPH6-DT
DMDM Disease mutations100507466
Blocks (Seattle)DPH6-DT
Human Protein Atlas [tissue]ENSG00000248079-DPH6-DT [tissue]
Protein Interaction databases
FunCoupENSG00000248079
BioGRIDDPH6-DT
STRING (EMBL)DPH6-DT
ZODIACDPH6-DT
Ontologies - Pathways
Huge Navigator DPH6-DT [HugePedia]
snp3D : Map Gene to Disease100507466
BioCentury BCIQDPH6-DT
ClinGenDPH6-DT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507466
Clinical trialDPH6-DT
Miscellaneous
canSAR (ICR)DPH6-DT (select the gene name)
DataMed IndexDPH6-DT
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDPH6-DT
EVEXDPH6-DT
GoPubMedDPH6-DT
iHOPDPH6-DT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:26:08 CEST 2019

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