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Taking over the Atlas
Dear Colleagues,
The Atlas, once more, is in great danger, and I will have to proceed to a collective economic lay-off of all the team involved in the Atlas before the begining of April 2015 (a foundation having suddenly withdrawn its commitment to support the Atlas). I ask you herein if any Scientific Society (a Society of Cytogenetics, of Clinical Genetics, of Hematology, or a Cancer Society, or any other...), any University and/or Hospital, any Charity, or any database would be interested in taking over the Atlas, in whole or in part. If taking charge of the whole lot is too big, a consortium of various actors could be the solution (I am myself trying to find partners). Could you please spread the information, contact the relevant authorities, and find partners.
Survival of the Atlas will be critically dependant upon your ability to find solutions (and urgently!).
Kind regards.
Jean-Loup Huret jlhuret@AtlasGeneticsOncology.org
Donations are also welcome
If each casual visitor gives 3 Euros or Dollars, the Atlas is saved in a week !
If each professional gives 100 Euros or Dollars once a year (now), the Atlas is saved in 2 weeks !
Don't let the Atlas imminent demise
Note: we send fiscal receipts for donations equal or above 50 Euros or Dollars

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DPP3 (dipeptidyl-peptidase 3)

Identity

Other namesDPPIII
HGNC (Hugo) DPP3
LocusID (NCBI) 10072
Location 11q13.2
Location_base_pair Starts at 66247484 and ends at 66277130 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)DPP3   3008
Cards
Entrez_Gene (NCBI)DPP3  10072  dipeptidyl-peptidase 3
GeneCards (Weizmann)DPP3
Ensembl hg19 (Hinxton)ENSG00000254986 [Gene_View]  chr11:66247484-66277130 [Contig_View]  DPP3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000254986 [Gene_View]  chr11:66247484-66277130 [Contig_View]  DPP3 [Vega]
ICGC DataPortalENSG00000254986
cBioPortalDPP3
AceView (NCBI)DPP3
Genatlas (Paris)DPP3
WikiGenes10072
SOURCE (Princeton)DPP3
Genomic and cartography
GoldenPath hg19 (UCSC)DPP3  -     chr11:66247484-66277130 +  11q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DPP3  -     11q13.2   [Description]    (hg38-Dec_2013)
EnsemblDPP3 - 11q13.2 [CytoView hg19]  DPP3 - 11q13.2 [CytoView hg38]
Mapping of homologs : NCBIDPP3 [Mapview hg19]  DPP3 [Mapview hg38]
OMIM606818   
Gene and transcription
Genbank (Entrez)AB017970 AJ271216 AK021449 AK025984 AK222566
RefSeq transcript (Entrez)NM_001256670 NM_005700 NM_130443
RefSeq genomic (Entrez)NC_000011 NC_018922 NG_032068 NT_167190 NW_004929380
Consensus coding sequences : CCDS (NCBI)DPP3
Cluster EST : UnigeneHs.740670 [ NCBI ]
CGAP (NCI)Hs.740670
Alternative Splicing : Fast-db (Paris)GSHG0005018
Alternative Splicing GalleryENSG00000254986
Gene ExpressionDPP3 [ NCBI-GEO ]     DPP3 [ SEEK ]   DPP3 [ MEM ]
SOURCE (Princeton)Expression in : [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NY33 (Uniprot)
NextProtQ9NY33  [Medical]
With graphics : InterProQ9NY33
Splice isoforms : SwissVarQ9NY33 (Swissvar)
Catalytic activity : Enzyme3.4.14.4 [ Enzyme-Expasy ]   3.4.14.43.4.14.4 [ IntEnz-EBI ]   3.4.14.4 [ BRENDA ]   3.4.14.4 [ KEGG ]   
Domains : Interpro (EBI)Dipeptidyl-peptase3   
Related proteins : CluSTrQ9NY33
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM Disease mutations10072
Blocks (Seattle)Q9NY33
PDB (SRS)3FVY    3T6B    3T6J   
PDB (PDBSum)3FVY    3T6B    3T6J   
PDB (IMB)3FVY    3T6B    3T6J   
PDB (RSDB)3FVY    3T6B    3T6J   
Human Protein AtlasENSG00000254986
Peptide AtlasQ9NY33
HPRD06012
IPIIPI00020672   IPI00645171   IPI00976265   IPI00976779   IPI00975587   IPI00978989   IPI00985505   IPI00979514   IPI01018750   
Protein Interaction databases
DIP (DOE-UCLA)Q9NY33
IntAct (EBI)Q9NY33
FunCoupENSG00000254986
BioGRIDDPP3
IntegromeDBDPP3
STRING (EMBL)DPP3
Ontologies - Pathways
QuickGOQ9NY33
Ontology : AmiGOprotein binding  nucleoplasm  cytoplasm  plasma membrane  proteolysis  metallopeptidase activity  dipeptidyl-peptidase activity  zinc ion binding  extracellular exosome  
Ontology : EGO-EBIprotein binding  nucleoplasm  cytoplasm  plasma membrane  proteolysis  metallopeptidase activity  dipeptidyl-peptidase activity  zinc ion binding  extracellular exosome  
Protein Interaction DatabaseDPP3
DoCM (Curated mutations)DPP3
Wikipedia pathwaysDPP3
Gene fusion - rearrangements
Polymorphisms : SNP, variants
NCBI Variation ViewerDPP3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DPP3
dbVarDPP3
ClinVarDPP3
1000_GenomesDPP3 
Exome Variant ServerDPP3
SNP (GeneSNP Utah)DPP3
SNP : HGBaseDPP3
Genetic variants : HAPMAPDPP3
Genomic Variants (DGV)DPP3 [DGVbeta]
Mutations
ICGC Data PortalENSG00000254986 
Somatic Mutations in Cancer : COSMICDPP3 
CONAN: Copy Number AnalysisDPP3 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)11:66247484-66277130
Mutations and Diseases : HGMDDPP3
OMIM606818   
MedgenDPP3
NextProtQ9NY33 [Medical]
GENETestsDPP3
Disease Genetic AssociationDPP3
Huge Navigator DPP3 [HugePedia]  DPP3 [HugeCancerGEM]
snp3D : Map Gene to Disease10072
DGIdb (Drug Gene Interaction db)DPP3
General knowledge
Homologs : HomoloGeneDPP3
Homology/Alignments : Family Browser (UCSC)DPP3
Phylogenetic Trees/Animal Genes : TreeFamDPP3
Chemical/Protein Interactions : CTD10072
Chemical/Pharm GKB GenePA27466
Clinical trialDPP3
Cancer Resource (Charite)ENSG00000254986
Other databases
Probes
Litterature
PubMed51 Pubmed reference(s) in Entrez
CoreMineDPP3
GoPubMedDPP3
iHOPDPP3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated02-2015Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Mar 28 15:14:35 CET 2015

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jlhuret@AtlasGeneticsOncology.org.