DSC2 (desmocollin 2)

Identity

Other names	ARVD11
	CDHF2
	DG2
	DGII/III
	DKFZp686I11137
	DSC3
HGNC	DSC2
Location	18q12.1
Location_base_pair	Starts at 26899940 and ends at 26936386 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	DSC2   3036
Entrez_Gene	DSC2  1824  desmocollin 2
	Cards
GeneCards	DSC2
Ensembl	DSC2 [Search_View]   ENSG00000134755 [Gene_View]
Genatlas	DSC2
GeneLynx	DSC2
eGenome	DSC2
euGene	1824
	Genomic and cartography
GoldenPath	DSC2  -  18q12.1   chr18:26899940-26936386 -  18q12.1   [Description]    (hg18-March_2006)
Ensembl	DSC2 - 18q12.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	DSC2
	Gene and transcription
Genbank	AK290313 [ ENTREZ ]
Genbank	BC063291 [ ENTREZ ]
Genbank	BE813598 [ ENTREZ ]
Genbank	BU735677 [ ENTREZ ]
Genbank	BX648425 [ ENTREZ ]
RefSeq	NM_004949 [ SRS ]    NM_004949 [ ENTREZ ]
RefSeq	NM_024422 [ SRS ]    NM_024422 [ ENTREZ ]
RefSeq	AC_000061 [ SRS ]    AC_000061 [ ENTREZ ]
RefSeq	AC_000150 [ SRS ]    AC_000150 [ ENTREZ ]
RefSeq	NC_000018 [ SRS ]    NC_000018 [ ENTREZ ]
RefSeq	NG_008208 [ SRS ]    NG_008208 [ ENTREZ ]
RefSeq	NT_010966 [ SRS ]    NT_010966 [ ENTREZ ]
RefSeq	NW_001838467 [ SRS ]    NW_001838467 [ ENTREZ ]
RefSeq	NW_927095 [ SRS ]    NW_927095 [ ENTREZ ]
AceView	DSC2 AceView - NCBI
Unigene	Hs.95612 [ SRS ]    Hs.95612 [ NCBI ]     HS95612 [ spliceNest ]
Fast-db	2956 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q02487 [ SRS]    Q02487 [ EXPASY ]     Q02487 [ INTERPRO ]     Q02487 [ UNIPROT ]
Prosite	PS00232 CADHERIN_1 [ SRS ]    PS00232 CADHERIN_1 [ Expasy ]
Prosite	PS50268 CADHERIN_2 [ SRS ]    PS50268 CADHERIN_2 [ Expasy ]
Interpro	IPR002126 Cadherin [ SRS ]    IPR002126 Cadherin [ EBI ]
Interpro	IPR014868 Cadherin_pro [ SRS ]    IPR014868 Cadherin_pro [ EBI ]
Interpro	IPR009122 Desmo_cadherin [ SRS ]    IPR009122 Desmo_cadherin [ EBI ]
Interpro	IPR009124 Desmocollin [ SRS ]    IPR009124 Desmocollin [ EBI ]
CluSTr	Q02487
Pfam	PF00028 Cadherin [ SRS ]    PF00028 Cadherin [ Sanger ]    pfam00028 [ NCBI-CDD ]
Pfam	PF08758 Cadherin_pro [ SRS ]    PF08758 Cadherin_pro [ Sanger ]    pfam08758 [ NCBI-CDD ]
Smart	SM00112 CA [EMBL]
Blocks	Q02487
HPRD	00512
	Protein Interaction databases
DIP	Q02487
IntAct	Q02487
	Polymorphism : SNP, mutations, diseases
OMIM	125645;610476    [ map ]
GENECLINICS	125645;610476
SNP	DSC2 [dbSNP-NCBI]
SNP	NM_004949 [SNP-NCI]
SNP	NM_024422 [SNP-NCI]
SNP	DSC2 [GeneSNPs - Utah]  DSC2] [HGBASE - SRS]
HAPMAP	DSC2 [HAPMAP]
HGMD	DSC2
	General knowledge
Family Browser	DSC2 [UCSC Family Browser]
SOURCE	NM_004949
SOURCE	NM_024422
SMD	Hs.95612
SAGE	Hs.95612
GO	calcium ion binding [Amigo]  calcium ion binding
GO	protein binding [Amigo]  protein binding
GO	plasma membrane [Amigo]  plasma membrane
GO	cell adhesion [Amigo]  cell adhesion
GO	homophilic cell adhesion [Amigo]  homophilic cell adhesion
GO	integral to membrane [Amigo]  integral to membrane
GO	cell junction [Amigo]  cell junction
KEGG	Cell Communication
PubGene	DSC2
TreeFam	DSC2
CTD	1824 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	DSC2 Related clones (RZPD - Berlin)
	PubMed
PubMed	28 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:39:01 2008