Atlas of Genetics and Cytogenetics in Oncology and Haematology

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EDA2R (ectodysplasin A2 receptor)

Identity

Alias_symbol (synonym)XEDAR
EDA-A2R
EDAA2R
TNFRSF27
Other alias
HGNC (Hugo) EDA2R
LocusID (NCBI) 60401
Atlas_Id 42843
Location Xq12  [Link to chromosome band Xq12]
Location_base_pair Starts at 66595640 and ends at 66639094 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)EDA2R   17756
Cards
Entrez_Gene (NCBI)EDA2R  60401  ectodysplasin A2 receptor
AliasesEDA-A2R; EDAA2R; TNFRSF27; XEDAR
GeneCards (Weizmann)EDA2R
Ensembl hg19 (Hinxton)ENSG00000131080 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000131080 [Gene_View]  ENSG00000131080 [Sequence]  chrX:66595640-66639094 [Contig_View]  EDA2R [Vega]
ICGC DataPortalENSG00000131080
TCGA cBioPortalEDA2R
AceView (NCBI)EDA2R
Genatlas (Paris)EDA2R
WikiGenes60401
SOURCE (Princeton)EDA2R
Genetics Home Reference (NIH)EDA2R
Genomic and cartography
GoldenPath hg38 (UCSC)EDA2R  -     chrX:66595640-66639094 -  Xq12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EDA2R  -     Xq12   [Description]    (hg19-Feb_2009)
GoldenPathEDA2R - Xq12 [CytoView hg19]  EDA2R - Xq12 [CytoView hg38]
ImmunoBaseENSG00000131080
Mapping of homologs : NCBIEDA2R [Mapview hg19]  EDA2R [Mapview hg38]
OMIM300276   
Gene and transcription
Genbank (Entrez)AF298812 AK296264 AK299018 AK314881 AY152724
RefSeq transcript (Entrez)NM_001199687 NM_001199688 NM_001199689 NM_001242310 NM_001324199 NM_001324201 NM_001324202 NM_001324204 NM_001324205 NM_001324206 NM_021783
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EDA2R
Alternative Splicing GalleryENSG00000131080
Gene ExpressionEDA2R [ NCBI-GEO ]   EDA2R [ EBI - ARRAY_EXPRESS ]   EDA2R [ SEEK ]   EDA2R [ MEM ]
Gene Expression Viewer (FireBrowse)EDA2R [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)60401
GTEX Portal (Tissue expression)EDA2R
Human Protein AtlasENSG00000131080-EDA2R [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EDA2R
DMDM Disease mutations60401
Blocks (Seattle)EDA2R
Human Protein Atlas [tissue]ENSG00000131080-EDA2R [tissue]
HPRD02230
IPIIPI00029116   IPI00456756   IPI00456757   IPI00910892   IPI00909188   
Protein Interaction databases
FunCoupENSG00000131080
BioGRIDEDA2R
STRING (EMBL)EDA2R
ZODIACEDA2R
Ontologies - Pathways
Huge Navigator EDA2R [HugePedia]
snp3D : Map Gene to Disease60401
BioCentury BCIQEDA2R
ClinGenEDA2R
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD60401
Chemical/Pharm GKB GenePA134974675
Clinical trialEDA2R
Miscellaneous
canSAR (ICR)EDA2R (select the gene name)
DataMed IndexEDA2R
Probes
Litterature
PubMed32 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEDA2R
EVEXEDA2R
GoPubMedEDA2R
iHOPEDA2R
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Feb 19 16:42:13 CET 2020
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