Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

EDDM13 (epididymal protein 13)

Identity

Other alias-
HGNC (Hugo) EDDM13
LocusID (NCBI) 100506374
Atlas_Id 80612
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 56272769 and ends at 56310426 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)EDDM13   53168
Cards
Entrez_Gene (NCBI)EDDM13  100506374  epididymal protein 13
Aliases
GeneCards (Weizmann)EDDM13
Ensembl hg19 (Hinxton)ENSG00000267710 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267710 [Gene_View]  ENSG00000267710 [Sequence]  chr19:56272769-56310426 [Contig_View]  EDDM13 [Vega]
ICGC DataPortalENSG00000267710
TCGA cBioPortalEDDM13
AceView (NCBI)EDDM13
Genatlas (Paris)EDDM13
WikiGenes100506374
SOURCE (Princeton)EDDM13
Genetics Home Reference (NIH)EDDM13
Genomic and cartography
GoldenPath hg38 (UCSC)EDDM13  -     chr19:56272769-56310426 +  19q13.43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EDDM13  -     19q13.43   [Description]    (hg19-Feb_2009)
GoldenPathEDDM13 - 19q13.43 [CytoView hg19]  EDDM13 - 19q13.43 [CytoView hg38]
ImmunoBaseENSG00000267710
Mapping of homologs : NCBIEDDM13 [Mapview hg19]  EDDM13 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA335322
RefSeq transcript (Entrez)NM_001354658
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EDDM13
Cluster EST : UnigeneHs.631532 [ NCBI ]
CGAP (NCI)Hs.631532
Alternative Splicing GalleryENSG00000267710
Gene ExpressionEDDM13 [ NCBI-GEO ]   EDDM13 [ EBI - ARRAY_EXPRESS ]   EDDM13 [ SEEK ]   EDDM13 [ MEM ]
Gene Expression Viewer (FireBrowse)EDDM13 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506374
GTEX Portal (Tissue expression)EDDM13
Human Protein AtlasENSG00000267710-EDDM13 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EDDM13
DMDM Disease mutations100506374
Blocks (Seattle)EDDM13
Human Protein Atlas [tissue]ENSG00000267710-EDDM13 [tissue]
Protein Interaction databases
FunCoupENSG00000267710
BioGRIDEDDM13
STRING (EMBL)EDDM13
ZODIACEDDM13
Ontologies - Pathways
Huge Navigator EDDM13 [HugePedia]
snp3D : Map Gene to Disease100506374
BioCentury BCIQEDDM13
ClinGenEDDM13
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506374
Clinical trialEDDM13
Miscellaneous
canSAR (ICR)EDDM13 (select the gene name)
DataMed IndexEDDM13
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEDDM13
EVEXEDDM13
GoPubMedEDDM13
iHOPEDDM13
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:26:26 CEST 2019

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.