Atlas of Genetics and Cytogenetics in Oncology and Haematology


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EGOT (eosinophil granule ontogeny transcript)

Identity

Alias (NCBI)EGO
NCRNA00190
HGNC (Hugo) EGOT
HGNC Alias symbEGO
NCRNA00190
HGNC Alias nameeosinophil granule ontogeny
 non-protein coding RNA 190
HGNC Previous nameeosinophil granule ontogeny transcript (non-protein coding)
LocusID (NCBI) 100126791
Atlas_Id 55745
Location 3p26.1  [Link to chromosome band 3p26]
Location_base_pair Starts at 4749194 and ends at 4751590 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EGOT   37129
Cards
Entrez_Gene (NCBI)EGOT  100126791  eosinophil granule ontogeny transcript
AliasesEGO; NCRNA00190
GeneCards (Weizmann)EGOT
Ensembl hg19 (Hinxton)ENSG00000235947 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235947 [Gene_View]  ENSG00000235947 [Sequence]  chr3:4749194-4751590 [Contig_View]  EGOT [Vega]
ICGC DataPortalENSG00000235947
TCGA cBioPortalEGOT
AceView (NCBI)EGOT
Genatlas (Paris)EGOT
WikiGenes100126791
SOURCE (Princeton)EGOT
Genetics Home Reference (NIH)EGOT
Genomic and cartography
GoldenPath hg38 (UCSC)EGOT  -     chr3:4749194-4751590 -  3p26.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EGOT  -     3p26.1   [Description]    (hg19-Feb_2009)
GoldenPathEGOT - 3p26.1 [CytoView hg19]  EGOT - 3p26.1 [CytoView hg38]
ImmunoBaseENSG00000235947
genome Data Viewer NCBIEGOT [Mapview hg19]  
OMIM611662   
Gene and transcription
Genbank (Entrez)BC039547 HG975392
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EGOT
Alternative Splicing GalleryENSG00000235947
Gene ExpressionEGOT [ NCBI-GEO ]   EGOT [ EBI - ARRAY_EXPRESS ]   EGOT [ SEEK ]   EGOT [ MEM ]
Gene Expression Viewer (FireBrowse)EGOT [ Firebrowse - Broad ]
GenevisibleExpression of EGOT in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100126791
GTEX Portal (Tissue expression)EGOT
Human Protein AtlasENSG00000235947-EGOT [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EGOT
DMDM Disease mutations100126791
Blocks (Seattle)EGOT
Human Protein Atlas [tissue]ENSG00000235947-EGOT [tissue]
Protein Interaction databases
FunCoupENSG00000235947
BioGRIDEGOT
STRING (EMBL)EGOT
ZODIACEGOT
Ontologies - Pathways
Huge Navigator EGOT [HugePedia]
snp3D : Map Gene to Disease100126791
BioCentury BCIQEGOT
ClinGenEGOT
Clinical trials, drugs, therapy
Protein Interactions : CTD100126791
Pharm GKB GenePA165697115
Clinical trialEGOT
Miscellaneous
canSAR (ICR)EGOT (select the gene name)
HarmonizomeEGOT
DataMed IndexEGOT
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEGOT
EVEXEGOT
GoPubMedEGOT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 15:11:44 CEST 2020

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