| Nomenclature |
HGNC (Hugo) | EGR4 3241 |
| Cards |
Entrez_Gene (NCBI) | EGR4 1961 early growth response 4 |
Aliases | AT133; NGFI-C; NGFIC; PAT133 |
GeneCards (Weizmann) | EGR4 |
Ensembl hg19 (Hinxton) | ENSG00000135625 [Gene_View] |
Ensembl hg38 (Hinxton) | ENSG00000135625 [Gene_View]  ENSG00000135625 [Sequence] chr2:73290929-73293701 [Contig_View] EGR4 [Vega] |
ICGC DataPortal | ENSG00000135625 |
TCGA cBioPortal | EGR4 |
AceView (NCBI) | EGR4 |
Genatlas (Paris) | EGR4 |
WikiGenes | 1961 |
SOURCE (Princeton) | EGR4 |
Genetics Home Reference (NIH) | EGR4 |
| Genomic and cartography |
GoldenPath hg38 (UCSC) | EGR4 - chr2:73290929-73293701 - 2p13.2 [Description] (hg38-Dec_2013) |
GoldenPath hg19 (UCSC) | EGR4 - 2p13.2 [Description] (hg19-Feb_2009) |
GoldenPath | EGR4 - 2p13.2 [CytoView hg19] EGR4 - 2p13.2 [CytoView hg38] |
ImmunoBase | ENSG00000135625 |
Mapping of homologs : NCBI | EGR4 [Mapview hg19] EGR4 [Mapview hg38] |
OMIM | 128992 |
| Gene and transcription |
Genbank (Entrez) | AK314154 BC034462 BC136252 BC143379 BX091371 |
RefSeq transcript (Entrez) | NM_001965 |
RefSeq genomic (Entrez) | |
Consensus coding sequences : CCDS (NCBI) | EGR4 |
Cluster EST : Unigene | Hs.3052 [ NCBI ] |
CGAP (NCI) | Hs.3052 |
Alternative Splicing Gallery | ENSG00000135625 |
Gene Expression | EGR4 [ NCBI-GEO ] EGR4 [ EBI - ARRAY_EXPRESS ]
EGR4 [ SEEK ] EGR4 [ MEM ] |
Gene Expression Viewer (FireBrowse) | EGR4 [ Firebrowse - Broad ] |
SOURCE (Princeton) | Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60] |
Genevestigator | Expression in : [tissues]  [cell-lines]  [cancer]  [perturbations]   |
BioGPS (Tissue expression) | 1961 |
GTEX Portal (Tissue expression) | EGR4 |
Human Protein Atlas | ENSG00000135625-EGR4 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
UniProt/SwissProt | Q05215 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
NextProt | Q05215 [Sequence] [Exons] [Medical] [Publications] |
With graphics : InterPro | Q05215 |
Splice isoforms : SwissVar | Q05215 |
PhosPhoSitePlus | Q05215 |
Domaine pattern : Prosite (Expaxy) | ZINC_FINGER_C2H2_1 (PS00028) ZINC_FINGER_C2H2_2 (PS50157) |
Domains : Interpro (EBI) | Znf_C2H2_sf Znf_C2H2_type |
Domain families : Pfam (Sanger) | |
Domain families : Pfam (NCBI) | |
Domain families : Smart (EMBL) | ZnF_C2H2 (SM00355) |
Conserved Domain (NCBI) | EGR4 |
DMDM Disease mutations | 1961 |
Blocks (Seattle) | EGR4 |
Superfamily | Q05215 |
Human Protein Atlas [tissue] | ENSG00000135625-EGR4 [tissue] |
Peptide Atlas | Q05215 |
HPRD | 00550 |
IPI | IPI00289101 |
| Protein Interaction databases |
DIP (DOE-UCLA) | Q05215 |
IntAct (EBI) | Q05215 |
FunCoup | ENSG00000135625 |
BioGRID | EGR4 |
STRING (EMBL) | EGR4 |
ZODIAC | EGR4 |
| Ontologies - Pathways |
QuickGO | Q05215 |
Ontology : AmiGO | RNA polymerase II regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription factor activity nucleus regulation of transcription by RNA polymerase II positive regulation of cell proliferation sequence-specific DNA binding positive regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II metal ion binding cellular response to growth factor stimulus |
Ontology : EGO-EBI | RNA polymerase II regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription factor activity nucleus regulation of transcription by RNA polymerase II positive regulation of cell proliferation sequence-specific DNA binding positive regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II metal ion binding cellular response to growth factor stimulus |
NDEx Network | EGR4 |
Atlas of Cancer Signalling Network | EGR4 |
Wikipedia pathways | EGR4 |
| Orthology - Evolution |
OrthoDB | 1961 |
GeneTree (enSembl) | ENSG00000135625 |
Phylogenetic Trees/Animal Genes : TreeFam | EGR4 |
HOGENOM | Q05215 |
Homologs : HomoloGene | EGR4 |
Homology/Alignments : Family Browser (UCSC) | EGR4 |
| Gene fusions - Rearrangements |
Fusion : Quiver | EGR4 |
| Polymorphisms : SNP and Copy number variants |
NCBI Variation Viewer | EGR4 [hg38] |
dbSNP Single Nucleotide Polymorphism (NCBI) | EGR4 |
dbVar | EGR4 |
ClinVar | EGR4 |
1000_Genomes | EGR4 |
Exome Variant Server | EGR4 |
ExAC (Exome Aggregation Consortium) | ENSG00000135625 |
GNOMAD Browser | ENSG00000135625 |
Varsome Browser | EGR4 |
Genetic variants : HAPMAP | 1961 |
Genomic Variants (DGV) | EGR4 [DGVbeta] |
DECIPHER | EGR4 [patients] [syndromes] [variants] [genes] |
CONAN: Copy Number Analysis | EGR4 |
| Mutations |
ICGC Data Portal | EGR4 |
TCGA Data Portal | EGR4 |
Broad Tumor Portal | EGR4 |
OASIS Portal | EGR4 [ Somatic mutations - Copy number] |
Somatic Mutations in Cancer : COSMIC | EGR4 [overview] [genome browser] [tissue] [distribution] |
Somatic Mutations in Cancer : COSMIC3D | EGR4 |
Mutations and Diseases : HGMD | EGR4 |
LOVD (Leiden Open Variation Database) | Whole genome datasets |
LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
BioMuta | search EGR4 |
DgiDB (Drug Gene Interaction Database) | EGR4 |
DoCM (Curated mutations) | EGR4 (select the gene name) |
CIViC (Clinical Interpretations of Variants in Cancer) | EGR4 (select a term) |
intoGen | EGR4 |
Cancer3D | EGR4(select the gene name) |
Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
---|
OMIM | 128992 |
Orphanet | |
DisGeNET | EGR4 |
Medgen | EGR4 |
Genetic Testing Registry | EGR4
|
NextProt | Q05215 [Medical] |
TSGene | 1961 |
GENETests | EGR4 |
Target Validation | EGR4 |
Huge Navigator |
EGR4 [HugePedia] |
snp3D : Map Gene to Disease | 1961 |
BioCentury BCIQ | EGR4 |
ClinGen | EGR4 |
| Clinical trials, drugs, therapy |
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Chemical/Protein Interactions : CTD | 1961 |
Chemical/Pharm GKB Gene | PA27676 |
Clinical trial | EGR4 |
| Miscellaneous |
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canSAR (ICR) | EGR4 (select the gene name) |
DataMed Index | EGR4 |
| Probes |
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| Litterature |
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PubMed | 18 Pubmed reference(s) in Entrez |
GeneRIFs | Gene References Into Functions (Entrez) |
CoreMine | EGR4 |
EVEX | EGR4 |
GoPubMed | EGR4 |
iHOP | EGR4 |