Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ELK2AP (ETS transcription factor ELK2A, pseudogene)

Identity

Alias_namesELK2
ELK2P1
ELK2, member of ETS oncogene family, pseudogene 1
ELK2A, member of ETS oncogene family, pseudogene
ETS transcription factor ELK2A pseudogene
Alias_symbol (synonym)ELK2.1
Other alias
HGNC (Hugo) ELK2AP
LocusID (NCBI) 2003
Atlas_Id 51341
Location 14q32.33  [Link to chromosome band 14q32]
Location_base_pair Starts at 105669577 and ends at 105672807 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ELK2AP   3323
Cards
Entrez_Gene (NCBI)ELK2AP  2003  ETS transcription factor ELK2A, pseudogene
AliasesELK2; ELK2.1; ELK2P1
GeneCards (Weizmann)ELK2AP
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr14:105669577-105672807 [Contig_View]  ELK2AP [Vega]
TCGA cBioPortalELK2AP
AceView (NCBI)ELK2AP
Genatlas (Paris)ELK2AP
WikiGenes2003
SOURCE (Princeton)ELK2AP
Genetics Home Reference (NIH)ELK2AP
Genomic and cartography
GoldenPath hg38 (UCSC)ELK2AP  -     chr14:105669577-105672807 -  14q32.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ELK2AP  -     14q32.33   [Description]    (hg19-Feb_2009)
GoldenPathELK2AP - 14q32.33 [CytoView hg19]  ELK2AP - 14q32.33 [CytoView hg38]
Mapping of homologs : NCBIELK2AP [Mapview hg19]  ELK2AP [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB095165
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000014 NG_001019 NG_001114 NT_187600
Consensus coding sequences : CCDS (NCBI)ELK2AP
Cluster EST : UnigeneHs.744419 [ NCBI ]
CGAP (NCI)Hs.744419
Gene ExpressionELK2AP [ NCBI-GEO ]   ELK2AP [ EBI - ARRAY_EXPRESS ]   ELK2AP [ SEEK ]   ELK2AP [ MEM ]
Gene Expression Viewer (FireBrowse)ELK2AP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)2003
GTEX Portal (Tissue expression)ELK2AP
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ELK2AP
DMDM Disease mutations2003
Blocks (Seattle)ELK2AP
Protein Interaction databases
BioGRIDELK2AP
STRING (EMBL)ELK2AP
ZODIACELK2AP
Ontologies - Pathways
Huge Navigator ELK2AP [HugePedia]
snp3D : Map Gene to Disease2003
BioCentury BCIQELK2AP
ClinGenELK2AP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2003
Chemical/Pharm GKB GenePA27750
Clinical trialELK2AP
Miscellaneous
canSAR (ICR)ELK2AP (select the gene name)
DataMed IndexELK2AP
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineELK2AP
EVEXELK2AP
GoPubMedELK2AP
iHOPELK2AP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Nov 13 17:41:49 CET 2019
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.