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ELMO3 (engulfment and cell motility 3)

Identity

Alias_namesengulfment and cell motility 3 (ced-12 homolog, C. elegans)
Alias_symbol (synonym)FLJ13824
CED12
ELMO-3
CED-12
Other alias
HGNC (Hugo) ELMO3
LocusID (NCBI) 79767
Atlas_Id 55822
Location 16q22.1  [Link to chromosome band 16q22]
Location_base_pair Starts at 67199125 and ends at 67204024 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ELMO3   17289
Cards
Entrez_Gene (NCBI)ELMO3  79767  engulfment and cell motility 3
AliasesCED-12; CED12; ELMO-3
GeneCards (Weizmann)ELMO3
Ensembl hg19 (Hinxton)ENSG00000102890 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000102890 [Gene_View]  ENSG00000102890 [Sequence]  chr16:67199125-67204024 [Contig_View]  ELMO3 [Vega]
ICGC DataPortalENSG00000102890
TCGA cBioPortalELMO3
AceView (NCBI)ELMO3
Genatlas (Paris)ELMO3
WikiGenes79767
SOURCE (Princeton)ELMO3
Genetics Home Reference (NIH)ELMO3
Genomic and cartography
GoldenPath hg38 (UCSC)ELMO3  -     chr16:67199125-67204024 +  16q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ELMO3  -     16q22.1   [Description]    (hg19-Feb_2009)
GoldenPathELMO3 - 16q22.1 [CytoView hg19]  ELMO3 - 16q22.1 [CytoView hg38]
ImmunoBaseENSG00000102890
Mapping of homologs : NCBIELMO3 [Mapview hg19]  ELMO3 [Mapview hg38]
OMIM606422   
Gene and transcription
Genbank (Entrez)AI955864 AK023886 AK056923 AK300976 BC015524
RefSeq transcript (Entrez)NM_024712
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ELMO3
Cluster EST : UnigeneHs.377416 [ NCBI ]
CGAP (NCI)Hs.377416
Alternative Splicing GalleryENSG00000102890
Gene ExpressionELMO3 [ NCBI-GEO ]   ELMO3 [ EBI - ARRAY_EXPRESS ]   ELMO3 [ SEEK ]   ELMO3 [ MEM ]
Gene Expression Viewer (FireBrowse)ELMO3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79767
GTEX Portal (Tissue expression)ELMO3
Human Protein AtlasENSG00000102890-ELMO3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96BJ8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96BJ8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96BJ8
Splice isoforms : SwissVarQ96BJ8
PhosPhoSitePlusQ96BJ8
Domaine pattern : Prosite (Expaxy)ELMO (PS51335)   
Domains : Interpro (EBI)ARM-type_fold    DUF3361    ELMO3    ELMO_dom    PH-like_dom_sf    PH_domain   
Domain families : Pfam (Sanger)DUF3361 (PF11841)    ELMO_CED12 (PF04727)    PH_12 (PF16457)   
Domain families : Pfam (NCBI)pfam11841    pfam04727    pfam16457   
Conserved Domain (NCBI)ELMO3
DMDM Disease mutations79767
Blocks (Seattle)ELMO3
SuperfamilyQ96BJ8
Human Protein Atlas [tissue]ENSG00000102890-ELMO3 [tissue]
Peptide AtlasQ96BJ8
HPRD12104
IPIIPI00930637   IPI00793764   IPI00644140   
Protein Interaction databases
DIP (DOE-UCLA)Q96BJ8
IntAct (EBI)Q96BJ8
FunCoupENSG00000102890
BioGRIDELMO3
STRING (EMBL)ELMO3
ZODIACELMO3
Ontologies - Pathways
QuickGOQ96BJ8
Ontology : AmiGOprotein binding  cytoplasm  phagocytosis  apoptotic process  cell migration  SH3 domain binding  
Ontology : EGO-EBIprotein binding  cytoplasm  phagocytosis  apoptotic process  cell migration  SH3 domain binding  
NDEx NetworkELMO3
Atlas of Cancer Signalling NetworkELMO3
Wikipedia pathwaysELMO3
Orthology - Evolution
OrthoDB79767
GeneTree (enSembl)ENSG00000102890
Phylogenetic Trees/Animal Genes : TreeFamELMO3
HOGENOMQ96BJ8
Homologs : HomoloGeneELMO3
Homology/Alignments : Family Browser (UCSC)ELMO3
Gene fusions - Rearrangements
Fusion : QuiverELMO3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerELMO3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ELMO3
dbVarELMO3
ClinVarELMO3
1000_GenomesELMO3 
Exome Variant ServerELMO3
ExAC (Exome Aggregation Consortium)ENSG00000102890
GNOMAD BrowserENSG00000102890
Varsome BrowserELMO3
Genetic variants : HAPMAP79767
Genomic Variants (DGV)ELMO3 [DGVbeta]
DECIPHERELMO3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisELMO3 
Mutations
ICGC Data PortalELMO3 
TCGA Data PortalELMO3 
Broad Tumor PortalELMO3
OASIS PortalELMO3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICELMO3  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DELMO3
Mutations and Diseases : HGMDELMO3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ELMO3
DgiDB (Drug Gene Interaction Database)ELMO3
DoCM (Curated mutations)ELMO3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ELMO3 (select a term)
intoGenELMO3
Cancer3DELMO3(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606422   
Orphanet
DisGeNETELMO3
MedgenELMO3
Genetic Testing Registry ELMO3
NextProtQ96BJ8 [Medical]
TSGene79767
GENETestsELMO3
Target ValidationELMO3
Huge Navigator ELMO3 [HugePedia]
snp3D : Map Gene to Disease79767
BioCentury BCIQELMO3
ClinGenELMO3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79767
Chemical/Pharm GKB GenePA27756
Clinical trialELMO3
Miscellaneous
canSAR (ICR)ELMO3 (select the gene name)
DataMed IndexELMO3
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineELMO3
EVEXELMO3
GoPubMedELMO3
iHOPELMO3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Nov 13 17:41:51 CET 2019
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