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ERVH-3 (endogenous retrovirus group H member 3)

Identity

Alias_namesendogenous retrovirus group H, member 3
Alias_symbol (synonym)HERV-H/F
TCONS_l2_00025412
Other alias
HGNC (Hugo) ERVH-3
LocusID (NCBI) 100289683
Atlas_Id 62908
Location 6q12  [Link to chromosome band 6q12]
Location_base_pair Starts at 67881321 and ends at 67889145 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)ERVH-3   39055
Cards
Entrez_Gene (NCBI)ERVH-3  100289683  endogenous retrovirus group H member 3
AliasesHERV-H/F
GeneCards (Weizmann)ERVH-3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:67881321-67889145 [Contig_View]  ERVH-3 [Vega]
TCGA cBioPortalERVH-3
AceView (NCBI)ERVH-3
Genatlas (Paris)ERVH-3
WikiGenes100289683
SOURCE (Princeton)ERVH-3
Genetics Home Reference (NIH)ERVH-3
Genomic and cartography
GoldenPath hg38 (UCSC)ERVH-3  -     chr6:67881321-67889145 -  6q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ERVH-3  -     6q12   [Description]    (hg19-Feb_2009)
GoldenPathERVH-3 - 6q12 [CytoView hg19]  ERVH-3 - 6q12 [CytoView hg38]
Mapping of homologs : NCBIERVH-3 [Mapview hg19]  ERVH-3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ431196 BC021996
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ERVH-3
Cluster EST : UnigeneHs.289232 [ NCBI ]
CGAP (NCI)Hs.289232
Gene ExpressionERVH-3 [ NCBI-GEO ]   ERVH-3 [ EBI - ARRAY_EXPRESS ]   ERVH-3 [ SEEK ]   ERVH-3 [ MEM ]
Gene Expression Viewer (FireBrowse)ERVH-3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100289683
GTEX Portal (Tissue expression)ERVH-3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ERVH-3
DMDM Disease mutations100289683
Blocks (Seattle)ERVH-3
IPIIPI01019114   
Protein Interaction databases
BioGRIDERVH-3
STRING (EMBL)ERVH-3
ZODIACERVH-3
Ontologies - Pathways
Huge Navigator ERVH-3 [HugePedia]
snp3D : Map Gene to Disease100289683
BioCentury BCIQERVH-3
ClinGenERVH-3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100289683
Clinical trialERVH-3
Miscellaneous
canSAR (ICR)ERVH-3 (select the gene name)
DataMed IndexERVH-3
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineERVH-3
EVEXERVH-3
GoPubMedERVH-3
iHOPERVH-3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Sep 3 15:26:59 CEST 2019
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