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ERVK-23 (endogenous retrovirus group K member 23)

Identity

Alias_namesendogenous retrovirus group K, member 23
Alias_symbol (synonym)c21_A
Other alias
HGNC (Hugo) ERVK-23
LocusID (NCBI) 100616197
Atlas_Id 80070
Location 21q21.1  [Link to chromosome band 21q21]
Location_base_pair Starts at 18562309 and ends at 18562674 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)ERVK-23   39037
Cards
Entrez_Gene (NCBI)ERVK-23  100616197  endogenous retrovirus group K member 23
Aliasesc21_A
GeneCards (Weizmann)ERVK-23
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr21:18562309-18562674 [Contig_View]  ERVK-23 [Vega]
TCGA cBioPortalERVK-23
AceView (NCBI)ERVK-23
Genatlas (Paris)ERVK-23
WikiGenes100616197
SOURCE (Princeton)ERVK-23
Genetics Home Reference (NIH)ERVK-23
Genomic and cartography
GoldenPath hg38 (UCSC)ERVK-23  -     chr21:18562309-18562674 -  21q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ERVK-23  -     21q21.1   [Description]    (hg19-Feb_2009)
GoldenPathERVK-23 - 21q21.1 [CytoView hg19]  ERVK-23 - 21q21.1 [CytoView hg38]
Mapping of homologs : NCBIERVK-23 [Mapview hg19]  ERVK-23 [Mapview hg38]
Gene and transcription
Genbank (Entrez)EF543113 FN806847
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ERVK-23
Gene ExpressionERVK-23 [ NCBI-GEO ]   ERVK-23 [ EBI - ARRAY_EXPRESS ]   ERVK-23 [ SEEK ]   ERVK-23 [ MEM ]
Gene Expression Viewer (FireBrowse)ERVK-23 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616197
GTEX Portal (Tissue expression)ERVK-23
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ERVK-23
DMDM Disease mutations100616197
Blocks (Seattle)ERVK-23
Protein Interaction databases
BioGRIDERVK-23
STRING (EMBL)ERVK-23
ZODIACERVK-23
Ontologies - Pathways
Huge Navigator ERVK-23 [HugePedia]
snp3D : Map Gene to Disease100616197
BioCentury BCIQERVK-23
ClinGenERVK-23
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616197
Clinical trialERVK-23
Miscellaneous
canSAR (ICR)ERVK-23 (select the gene name)
DataMed IndexERVK-23
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineERVK-23
EVEXERVK-23
GoPubMedERVK-23
iHOPERVK-23
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Sep 3 15:27:02 CEST 2019
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