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EXD3 (exonuclease 3'-5' domain containing 3)

Identity

Alias_symbol (synonym)LOC54932
FLJ20433
mut-7
Other alias
HGNC (Hugo) EXD3
LocusID (NCBI) 54932
Atlas_Id 57934
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 137306894 and ends at 137423262 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CARD8 (19q13.33) / EXD3 (9q34.3)EXD3 (9q34.3) / CACNA1B (9q34.3)EXD3 (9q34.3) / PNPLA7 (9q34.3)
EXD3 (9q34.3) / ZNF276 (16q24.3)TPRN (9q34.3) / EXD3 (9q34.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 2 ]
  EXD3/PNPLA7 (9q34)
t(9;16)(q34;p11) YPEL3/EXD3


External links

Nomenclature
HGNC (Hugo)EXD3   26023
Cards
Entrez_Gene (NCBI)EXD3  54932  exonuclease 3'-5' domain containing 3
Aliasesmut-7
GeneCards (Weizmann)EXD3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr9:137306894-137423262 [Contig_View]  EXD3 [Vega]
TCGA cBioPortalEXD3
AceView (NCBI)EXD3
Genatlas (Paris)EXD3
WikiGenes54932
SOURCE (Princeton)EXD3
Genetics Home Reference (NIH)EXD3
Genomic and cartography
GoldenPath hg38 (UCSC)EXD3  -     chr9:137306894-137423262 -  9q34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EXD3  -     9q34.3   [Description]    (hg19-Feb_2009)
GoldenPathEXD3 - 9q34.3 [CytoView hg19]  EXD3 - 9q34.3 [CytoView hg38]
Mapping of homologs : NCBIEXD3 [Mapview hg19]  EXD3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB061798 AI682614 AK000440 AK055004 AK091390
RefSeq transcript (Entrez)NM_001286823 NM_017820
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EXD3
Cluster EST : UnigeneHs.721419 [ NCBI ]
CGAP (NCI)Hs.721419
Gene ExpressionEXD3 [ NCBI-GEO ]   EXD3 [ EBI - ARRAY_EXPRESS ]   EXD3 [ SEEK ]   EXD3 [ MEM ]
Gene Expression Viewer (FireBrowse)EXD3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)54932
GTEX Portal (Tissue expression)EXD3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EXD3
DMDM Disease mutations54932
Blocks (Seattle)EXD3
IPIIPI00413242   IPI00884892   IPI00885207   IPI00884936   IPI00015857   IPI00978692   IPI00976717   IPI00980218   IPI00977437   
Protein Interaction databases
BioGRIDEXD3
STRING (EMBL)EXD3
ZODIACEXD3
Ontologies - Pathways
Huge Navigator EXD3 [HugePedia]
snp3D : Map Gene to Disease54932
BioCentury BCIQEXD3
ClinGenEXD3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54932
Chemical/Pharm GKB GenePA164719422
Clinical trialEXD3
Miscellaneous
canSAR (ICR)EXD3 (select the gene name)
DataMed IndexEXD3
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEXD3
EVEXEXD3
GoPubMedEXD3
iHOPEXD3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Nov 13 17:42:29 CET 2019

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