FADS2 (fatty acid desaturase 2)

2007-02-01  

Identity

HGNC
LOCATION
11q12.2
LOCUSID
ALIAS
D6D,DES6,FADSD6,LLCDL2,SLL0262,TU13
FUSION GENES

Other Information

Locus ID:

NCBI: 9415
MIM: 606149
HGNC: 3575
Ensembl: ENSG00000134824

Variants:

dbSNP: 9415
ClinVar: 9415
TCGA: ENSG00000134824
COSMIC: FADS2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000134824ENST00000257261O95864
ENSG00000134824ENST00000278840O95864
ENSG00000134824ENST00000355484F5H622
ENSG00000134824ENST00000517312E5RGD8
ENSG00000134824ENST00000517839E5RHL3
ENSG00000134824ENST00000518606E5RGZ5
ENSG00000134824ENST00000521571F5GZ92
ENSG00000134824ENST00000521849O95864
ENSG00000134824ENST00000522056O95864
ENSG00000134824ENST00000522639F5GZU2
ENSG00000134824ENST00000574708F5GZU2

Expression (GTEx)

0
50
100
150
200
250

Pathways

PathwaySourceExternal ID
alpha-Linolenic acid metabolismKEGGko00592
Biosynthesis of unsaturated fatty acidsKEGGko01040
PPAR signaling pathwayKEGGko03320
alpha-Linolenic acid metabolismKEGGhsa00592
Biosynthesis of unsaturated fatty acidsKEGGhsa01040
PPAR signaling pathwayKEGGhsa03320
Fatty acid metabolismKEGGhsa01212
Fatty acid metabolismKEGGko01212
MetabolismREACTOMER-HSA-1430728
Metabolism of lipids and lipoproteinsREACTOMER-HSA-556833
alpha-linolenic (omega3) and linoleic (omega6) acid metabolismREACTOMER-HSA-2046104
alpha-linolenic acid (ALA) metabolismREACTOMER-HSA-2046106
Linoleic acid (LA) metabolismREACTOMER-HSA-2046105

Protein levels (Protein atlas)

Not detected
Low
Medium
High

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA443450AsthmaDiseaseLiterature, MultilinkAnnotationassociated24934276

References

Pubmed IDYearTitleCitations
383167672024Brain tissue- and cell type-specific eQTL Mendelian randomization reveals efficacy of FADS1 and FADS2 on cognitive function.0
385665502024Impact of FADS genotype on polyunsaturated fatty acid content in human milk extracellular vesicles: A genetic association study.0
388494352024FADS2 confers SCD1 inhibition resistance to cancer cells by modulating the ER stress response.0
383167672024Brain tissue- and cell type-specific eQTL Mendelian randomization reveals efficacy of FADS1 and FADS2 on cognitive function.0
385665502024Impact of FADS genotype on polyunsaturated fatty acid content in human milk extracellular vesicles: A genetic association study.0
388494352024FADS2 confers SCD1 inhibition resistance to cancer cells by modulating the ER stress response.0
366525412023Placental expression of Fatty Acid Desaturases 1, 2 and 3 in selected pregnancy pathologies.1
367885082023The integrative panel of fatty acid desaturase-2 (FADS2) rs174583 gene polymorphism and dietary indices (DQI-I and HEI) affects cardiovascular risk factors among obese individuals.0
367886182023The role of fatty acid desaturase 2 in multiple tumor types revealed by bulk and single-cell transcriptomes.0
368641352023Genome-wide analysis identifies genetic effects on reproductive success and ongoing natural selection at the FADS locus.10
375068602023Hsa_circ_0000073 promotes lipid synthesis of osteosarcoma through hsa-miR-1184/ FADS2 pathway.3
366525412023Placental expression of Fatty Acid Desaturases 1, 2 and 3 in selected pregnancy pathologies.1
367885082023The integrative panel of fatty acid desaturase-2 (FADS2) rs174583 gene polymorphism and dietary indices (DQI-I and HEI) affects cardiovascular risk factors among obese individuals.0
367886182023The role of fatty acid desaturase 2 in multiple tumor types revealed by bulk and single-cell transcriptomes.0
368641352023Genome-wide analysis identifies genetic effects on reproductive success and ongoing natural selection at the FADS locus.10

Citation

Dessen P

FADS2 (fatty acid desaturase 2)

Atlas Genet Cytogenet Oncol Haematol. 2007-02-01

Online version: http://atlasgeneticsoncology.org/gene/46480/fads2