FAM193B (family with sequence similarity 193 member B)

2011-06-01  

Identity

HGNC
FAM193B
LOCATION
5q35.3
LOCUSID
54540
ALIAS
IRIZIO
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 54540
MIM: 615813
HGNC: 25524
Ensembl: ENSG00000146067

Variants:

dbSNP: 54540
ClinVar: 54540
TCGA: ENSG00000146067
COSMIC: FAM193B

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000146067ENST00000502403D6RAX9
ENSG00000146067ENST00000506432D6RDZ2
ENSG00000146067ENST00000506955D6REQ2
ENSG00000146067ENST00000507212H0Y9G1
ENSG00000146067ENST00000507587H0Y9J9
ENSG00000146067ENST00000510163H0Y9W8
ENSG00000146067ENST00000510429D6RC29
ENSG00000146067ENST00000510479D6REE6
ENSG00000146067ENST00000513282H0Y9D3
ENSG00000146067ENST00000514747Q96PV7
ENSG00000146067ENST00000524677H0YCX2

Expression (GTEx)

0
50
100
150
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
211777672011IRIZIO: a novel gene cooperating with PAX3-FOXO1 in alveolar rhabdomyosarcoma (ARMS).4
261885162015Interactions of cullin3/KCTD5 complexes with both cytoplasmic and nuclear proteins: Evidence for a role in protein stabilization.2

Citation

Dessen P

FAM193B (family with sequence similarity 193 member B)

Atlas Genet Cytogenet Oncol Haematol. 2011-06-01

Online version: http://atlasgeneticsoncology.org/gene/52267/fam193b