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FAM243B (family with sequence similarity 243 member B)

Identity

Alias (NCBI)-
HGNC (Hugo) FAM243B
LocusID (NCBI) 102723451
Atlas_Id 80517
Location 21q22.12  [Link to chromosome band 21q22]
Location_base_pair Starts at 34400112 and ends at 34401072 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)FAM243B   53888
Cards
Entrez_Gene (NCBI)FAM243B  102723451  family with sequence similarity 243 member B
Aliases
GeneCards (Weizmann)FAM243B
Ensembl hg19 (Hinxton)ENSG00000277277 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000277277 [Gene_View]  ENSG00000277277 [Sequence]  chr21:34400112-34401072 [Contig_View]  FAM243B [Vega]
ICGC DataPortalENSG00000277277
TCGA cBioPortalFAM243B
AceView (NCBI)FAM243B
Genatlas (Paris)FAM243B
WikiGenes102723451
SOURCE (Princeton)FAM243B
Genetics Home Reference (NIH)FAM243B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM243B  -     chr21:34400112-34401072 -  21q22.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM243B  -     21q22.12   [Description]    (hg19-Feb_2009)
GoldenPathFAM243B - 21q22.12 [CytoView hg19]  FAM243B - 21q22.12 [CytoView hg38]
ImmunoBaseENSG00000277277
genome Data Viewer NCBIFAM243B [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001364711
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM243B
Alternative Splicing GalleryENSG00000277277
Gene ExpressionFAM243B [ NCBI-GEO ]   FAM243B [ EBI - ARRAY_EXPRESS ]   FAM243B [ SEEK ]   FAM243B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM243B [ Firebrowse - Broad ]
GenevisibleExpression of FAM243B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102723451
GTEX Portal (Tissue expression)FAM243B
Human Protein AtlasENSG00000277277-FAM243B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0DPQ4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0DPQ4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0DPQ4
Splice isoforms : SwissVarP0DPQ4
PhosPhoSitePlusP0DPQ4
Domains : Interpro (EBI)FAM243   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM243B
DMDM Disease mutations102723451
Blocks (Seattle)FAM243B
SuperfamilyP0DPQ4
Human Protein Atlas [tissue]ENSG00000277277-FAM243B [tissue]
Peptide AtlasP0DPQ4
Protein Interaction databases
DIP (DOE-UCLA)P0DPQ4
IntAct (EBI)P0DPQ4
FunCoupENSG00000277277
BioGRIDFAM243B
STRING (EMBL)FAM243B
ZODIACFAM243B
Ontologies - Pathways
QuickGOP0DPQ4
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM243B
Atlas of Cancer Signalling NetworkFAM243B
Wikipedia pathwaysFAM243B
Orthology - Evolution
OrthoDB102723451
GeneTree (enSembl)ENSG00000277277
Phylogenetic Trees/Animal Genes : TreeFamFAM243B
HOGENOMP0DPQ4
Homologs : HomoloGeneFAM243B
Homology/Alignments : Family Browser (UCSC)FAM243B
Gene fusions - Rearrangements
Fusion : QuiverFAM243B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM243B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM243B
dbVarFAM243B
ClinVarFAM243B
1000_GenomesFAM243B 
Exome Variant ServerFAM243B
GNOMAD BrowserENSG00000277277
Varsome BrowserFAM243B
Genetic variants : HAPMAP102723451
Genomic Variants (DGV)FAM243B [DGVbeta]
DECIPHERFAM243B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM243B 
Mutations
ICGC Data PortalFAM243B 
TCGA Data PortalFAM243B 
Broad Tumor PortalFAM243B
OASIS PortalFAM243B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM243B
BioMutasearch FAM243B
DgiDB (Drug Gene Interaction Database)FAM243B
DoCM (Curated mutations)FAM243B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM243B (select a term)
intoGenFAM243B
Cancer3DFAM243B(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETFAM243B
MedgenFAM243B
Genetic Testing Registry FAM243B
NextProtP0DPQ4 [Medical]
TSGene102723451
GENETestsFAM243B
Target ValidationFAM243B
Huge Navigator FAM243B [HugePedia]
snp3D : Map Gene to Disease102723451
BioCentury BCIQFAM243B
ClinGenFAM243B
Clinical trials, drugs, therapy
Protein Interactions : CTD102723451
Clinical trialFAM243B
Miscellaneous
canSAR (ICR)FAM243B (select the gene name)
HarmonizomeFAM243B
DataMed IndexFAM243B
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM243B
EVEXFAM243B
GoPubMedFAM243B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 15:55:28 CEST 2020

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