Atlas of Genetics and Cytogenetics in Oncology and Haematology

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GAGE4 (G antigen 4)

Identity

Alias (NCBI)CT4.4
HGNC (Hugo) GAGE4
HGNC Alias symbCT4.4
HGNC Alias namecancer/testis antigen family 4, member 4
LocusID (NCBI) 2576
Atlas_Id 40672
Location Xp11.23  [Link to chromosome band Xp11]
Location_base_pair Starts at 49341182 and ends at 49529981 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  Testis: Spermatocytic seminoma

External links

Nomenclature
HGNC (Hugo)GAGE4   4101
Cards
Entrez_Gene (NCBI)GAGE4  2576  G antigen 4
AliasesCT4.4
GeneCards (Weizmann)GAGE4
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chrX:49341182-49529981 [Contig_View]  GAGE4 [Vega]
TCGA cBioPortalGAGE4
AceView (NCBI)GAGE4
Genatlas (Paris)GAGE4
WikiGenes2576
SOURCE (Princeton)GAGE4
Genetics Home Reference (NIH)GAGE4
Genomic and cartography
GoldenPath hg38 (UCSC)GAGE4  -     chrX:49341182-49529981 +  Xp11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GAGE4  -     Xp11.23   [Description]    (hg19-Feb_2009)
GoldenPathGAGE4 - Xp11.23 [CytoView hg19]  GAGE4 - Xp11.23 [CytoView hg38]
genome Data Viewer NCBIGAGE4 [Mapview hg19]  
OMIM300597   
Gene and transcription
Genbank (Entrez)BC171769 CR542236 U19145
RefSeq transcript (Entrez)NM_001474
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GAGE4
Gene ExpressionGAGE4 [ NCBI-GEO ]   GAGE4 [ EBI - ARRAY_EXPRESS ]   GAGE4 [ SEEK ]   GAGE4 [ MEM ]
Gene Expression Viewer (FireBrowse)GAGE4 [ Firebrowse - Broad ]
GenevisibleExpression of GAGE4 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2576
GTEX Portal (Tissue expression)GAGE4
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GAGE4
DMDM Disease mutations2576
Blocks (Seattle)GAGE4
HPRD05031
IPIIPI00829712   
Protein Interaction databases
BioGRIDGAGE4
STRING (EMBL)GAGE4
ZODIACGAGE4
Ontologies - Pathways
Huge Navigator GAGE4 [HugePedia]
snp3D : Map Gene to Disease2576
BioCentury BCIQGAGE4
ClinGenGAGE4
Clinical trials, drugs, therapy
Protein Interactions : CTD2576
Pharm GKB GenePA28516
Clinical trialGAGE4
Miscellaneous
canSAR (ICR)GAGE4 (select the gene name)
HarmonizomeGAGE4
DataMed IndexGAGE4
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGAGE4
EVEXGAGE4
GoPubMedGAGE4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 15:14:19 CEST 2020
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