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GALR2 (galanin receptor 2)

Identity

Other namesGAL2-R
GALNR2
GALR-2
HGNC (Hugo) GALR2
LocusID (NCBI) 8811
Location 17q25.1
Location_base_pair Starts at 74070882 and ends at 74073622 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)GALR2   4133
Cards
Entrez_Gene (NCBI)GALR2  8811  galanin receptor 2
GeneCards (Weizmann)GALR2
Ensembl (Hinxton)ENSG00000182687 [Gene_View]  chr17:74070882-74073622 [Contig_View]  GALR2 [Vega]
AceView (NCBI)GALR2
Genatlas (Paris)GALR2
WikiGenes8811
SOURCE (Princeton)NM_003857
Genomic and cartography
GoldenPath (UCSC)GALR2  -  17q25.1   chr17:74070882-74073622 +  17q25.1   [Description]    (hg19-Feb_2009)
EnsemblGALR2 - 17q25.1 [CytoView]
Mapping of homologs : NCBIGALR2 [Mapview]
OMIM603691   
Gene and transcription
Genbank (Entrez)AF040630 AF080586 BC069130 BC074914 BC074915
RefSeq transcript (Entrez)NM_003857
RefSeq genomic (Entrez)AC_000149 NC_000017 NC_018928 NT_010783 NW_001838454 NW_004929407
Consensus coding sequences : CCDS (NCBI)GALR2
Cluster EST : UnigeneHs.666366 [ NCBI ]
CGAP (NCI)Hs.666366
Alternative Splicing : Fast-db (Paris)GSHG0012831
Alternative Splicing GalleryENSG00000182687
Gene ExpressionGALR2 [ NCBI-GEO ]     GALR2 [ SEEK ]   GALR2 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO43603 (Uniprot)
NextProtO43603  [Medical]
With graphics : InterProO43603
Splice isoforms : SwissVarO43603 (Swissvar)
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GAL2_rcpt    Galanin_rcpt    GPCR_Rhodpsn    GPCR_Rhodpsn_7TM   
Related proteins : CluSTrO43603
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
DMDM Disease mutations8811
Blocks (Seattle)O43603
Human Protein AtlasENSG00000182687
Peptide AtlasO43603
HPRD04735
IPIIPI00013353   
Protein Interaction databases
DIP (DOE-UCLA)O43603
IntAct (EBI)O43603
FunCoupENSG00000182687
BioGRIDGALR2
InParanoidO43603
Interologous Interaction database O43603
IntegromeDBGALR2
STRING (EMBL)GALR2
Ontologies - Pathways
Ontology : AmiGOgalanin receptor activity  protein binding  plasma membrane  muscle contraction  cell surface receptor signaling pathway  adenylate cyclase-modulating G-protein coupled receptor signaling pathway  negative regulation of adenylate cyclase activity  positive regulation of cytosolic calcium ion concentration  synaptic transmission  multicellular organismal development  digestion  learning or memory  feeding behavior  integral to membrane  neuron projection development  
Ontology : EGO-EBIgalanin receptor activity  protein binding  plasma membrane  muscle contraction  cell surface receptor signaling pathway  adenylate cyclase-modulating G-protein coupled receptor signaling pathway  negative regulation of adenylate cyclase activity  positive regulation of cytosolic calcium ion concentration  synaptic transmission  multicellular organismal development  digestion  learning or memory  feeding behavior  integral to membrane  neuron projection development  
Pathways : KEGGNeuroactive ligand-receptor interaction   
REACTOMEGALR2
Protein Interaction DatabaseGALR2
Wikipedia pathwaysGALR2
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)GALR2
SNP (GeneSNP Utah)GALR2
SNP : HGBaseGALR2
Genetic variants : HAPMAPGALR2
1000_GenomesGALR2 
ICGC programENSG00000182687 
Somatic Mutations in Cancer : COSMICGALR2 
CONAN: Copy Number AnalysisGALR2 
Mutations and Diseases : HGMDGALR2
OMIM603691   
GENETestsGALR2
Disease Genetic AssociationGALR2
Huge Navigator GALR2 [HugePedia]  GALR2 [HugeCancerGEM]
Genomic VariantsGALR2  GALR2 [DGVbeta]
Exome VariantGALR2
dbVarGALR2
ClinVarGALR2
snp3D : Map Gene to Disease8811
General knowledge
Homologs : HomoloGeneGALR2
Homology/Alignments : Family Browser (UCSC)GALR2
Phylogenetic Trees/Animal Genes : TreeFamGALR2
Chemical/Protein Interactions : CTD8811
Chemical/Pharm GKB GenePA28546
Clinical trialGALR2
Cancer Resource (Charite)ENSG00000182687
Other databases
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
CoreMineGALR2
iHOPGALR2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Apr 18 17:12:48 CEST 2014

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