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GCASPC (gall bladder cancer associated suppressor of pyruvate carboxylase lncRNA)

Identity

Alias_symbol (synonym)TCONS_00011605
RP1-56L9.7-001
lnc-SOD2-1
Other alias
HGNC (Hugo) GCASPC
LocusID (NCBI) 112441427
Atlas_Id 57457
Location 6q25.3  [Link to chromosome band 6q25]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)GCASPC   52281
Cards
Entrez_Gene (NCBI)GCASPC  112441427  gall bladder cancer associated suppressor of pyruvate carboxylase lncRNA
Aliaseslnc-SOD2-1
GeneCards (Weizmann)GCASPC
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  GCASPC [Vega]
TCGA cBioPortalGCASPC
AceView (NCBI)GCASPC
Genatlas (Paris)GCASPC
WikiGenes112441427
SOURCE (Princeton)GCASPC
Genetics Home Reference (NIH)GCASPC
Genomic and cartography
GoldenPath hg38 (UCSC)GCASPC  -  
GoldenPath hg19 (UCSC)GCASPC  -  
GoldenPathGCASPC - [CytoView hg19]  GCASPC - [CytoView hg38]
Mapping of homologs : NCBIGCASPC [Mapview hg19]  GCASPC [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GCASPC
Gene ExpressionGCASPC [ NCBI-GEO ]   GCASPC [ EBI - ARRAY_EXPRESS ]   GCASPC [ SEEK ]   GCASPC [ MEM ]
Gene Expression Viewer (FireBrowse)GCASPC [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)112441427
GTEX Portal (Tissue expression)GCASPC
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GCASPC
DMDM Disease mutations112441427
Blocks (Seattle)GCASPC
Protein Interaction databases
BioGRIDGCASPC
STRING (EMBL)GCASPC
ZODIACGCASPC
Ontologies - Pathways
Huge Navigator GCASPC [HugePedia]
snp3D : Map Gene to Disease112441427
BioCentury BCIQGCASPC
ClinGenGCASPC
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD112441427
Clinical trialGCASPC
Miscellaneous
canSAR (ICR)GCASPC (select the gene name)
DataMed IndexGCASPC
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGCASPC
EVEXGCASPC
GoPubMedGCASPC
iHOPGCASPC
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jan 27 14:43:29 CET 2020

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