| Nomenclature |
HGNC (Hugo) | GCNT4 17973 |
| Cards |
Entrez_Gene (NCBI) | GCNT4 51301 glucosaminyl (N-acetyl) transferase 4 |
Aliases | C2GNT3; LINC01336 |
GeneCards (Weizmann) | GCNT4 |
Ensembl hg19 (Hinxton) | ENSG00000176928 [Gene_View] |
Ensembl hg38 (Hinxton) | ENSG00000176928 [Gene_View]  ENSG00000176928 [Sequence] chr5:75027464-75030899 [Contig_View] GCNT4 [Vega] |
ICGC DataPortal | ENSG00000176928 |
TCGA cBioPortal | GCNT4 |
AceView (NCBI) | GCNT4 |
Genatlas (Paris) | GCNT4 |
WikiGenes | 51301 |
SOURCE (Princeton) | GCNT4 |
Genetics Home Reference (NIH) | GCNT4 |
| Genomic and cartography |
GoldenPath hg38 (UCSC) | GCNT4 - chr5:75027464-75030899 - 5q13.3 [Description] (hg38-Dec_2013) |
GoldenPath hg19 (UCSC) | GCNT4 - 5q13.3 [Description] (hg19-Feb_2009) |
GoldenPath | GCNT4 - 5q13.3 [CytoView hg19] GCNT4 - 5q13.3 [CytoView hg38] |
ImmunoBase | ENSG00000176928 |
Mapping of homologs : NCBI | GCNT4 [Mapview hg19] GCNT4 [Mapview hg38] |
OMIM | 616782 |
| Gene and transcription |
Genbank (Entrez) | AF132035 BG900784 DB344036 |
RefSeq transcript (Entrez) | NM_001366737 NM_016591 |
RefSeq genomic (Entrez) | |
Consensus coding sequences : CCDS (NCBI) | GCNT4 |
Cluster EST : Unigene | Hs.582288 [ NCBI ] |
CGAP (NCI) | Hs.582288 |
Alternative Splicing Gallery | ENSG00000176928 |
Gene Expression | GCNT4 [ NCBI-GEO ] GCNT4 [ EBI - ARRAY_EXPRESS ]
GCNT4 [ SEEK ] GCNT4 [ MEM ] |
Gene Expression Viewer (FireBrowse) | GCNT4 [ Firebrowse - Broad ] |
SOURCE (Princeton) | Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60] |
Genevestigator | Expression in : [tissues]  [cell-lines]  [cancer]  [perturbations]   |
BioGPS (Tissue expression) | 51301 |
GTEX Portal (Tissue expression) | GCNT4 |
Human Protein Atlas | ENSG00000176928-GCNT4 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
UniProt/SwissProt | Q9P109 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
NextProt | Q9P109 [Sequence] [Exons] [Medical] [Publications] |
With graphics : InterPro | Q9P109 |
Splice isoforms : SwissVar | Q9P109 |
Catalytic activity : Enzyme | 2.4.1.102 [ Enzyme-Expasy ] 2.4.1.1022.4.1.102 [ IntEnz-EBI ] 2.4.1.102 [ BRENDA ] 2.4.1.102 [ KEGG ] |
PhosPhoSitePlus | Q9P109 |
Domains : Interpro (EBI) | Glyco_trans_14 |
Domain families : Pfam (Sanger) | Branch (PF02485) |
Domain families : Pfam (NCBI) | pfam02485 |
Conserved Domain (NCBI) | GCNT4 |
DMDM Disease mutations | 51301 |
Blocks (Seattle) | GCNT4 |
Superfamily | Q9P109 |
Human Protein Atlas [tissue] | ENSG00000176928-GCNT4 [tissue] |
Peptide Atlas | Q9P109 |
HPRD | 16651 |
IPI | IPI00009879 |
| Protein Interaction databases |
DIP (DOE-UCLA) | Q9P109 |
IntAct (EBI) | Q9P109 |
FunCoup | ENSG00000176928 |
BioGRID | GCNT4 |
STRING (EMBL) | GCNT4 |
ZODIAC | GCNT4 |
| Ontologies - Pathways |
QuickGO | Q9P109 |
Ontology : AmiGO | Golgi membrane inter-male aggressive behavior beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity carbohydrate metabolic process protein O-linked glycosylation N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity integral component of membrane O-glycan processing thyroid hormone metabolic process tissue morphogenesis homeostasis of number of cells kidney morphogenesis |
Ontology : EGO-EBI | Golgi membrane inter-male aggressive behavior beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity carbohydrate metabolic process protein O-linked glycosylation N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity integral component of membrane O-glycan processing thyroid hormone metabolic process tissue morphogenesis homeostasis of number of cells kidney morphogenesis |
NDEx Network | GCNT4 |
Atlas of Cancer Signalling Network | GCNT4 |
Wikipedia pathways | GCNT4 |
| Orthology - Evolution |
OrthoDB | 51301 |
GeneTree (enSembl) | ENSG00000176928 |
Phylogenetic Trees/Animal Genes : TreeFam | GCNT4 |
HOGENOM | Q9P109 |
Homologs : HomoloGene | GCNT4 |
Homology/Alignments : Family Browser (UCSC) | GCNT4 |
| Gene fusions - Rearrangements |
Fusion : Quiver | GCNT4 |
| Polymorphisms : SNP and Copy number variants |
NCBI Variation Viewer | GCNT4 [hg38] |
dbSNP Single Nucleotide Polymorphism (NCBI) | GCNT4 |
dbVar | GCNT4 |
ClinVar | GCNT4 |
1000_Genomes | GCNT4 |
Exome Variant Server | GCNT4 |
ExAC (Exome Aggregation Consortium) | ENSG00000176928 |
GNOMAD Browser | ENSG00000176928 |
Varsome Browser | GCNT4 |
Genetic variants : HAPMAP | 51301 |
Genomic Variants (DGV) | GCNT4 [DGVbeta] |
DECIPHER | GCNT4 [patients] [syndromes] [variants] [genes] |
CONAN: Copy Number Analysis | GCNT4 |
| Mutations |
ICGC Data Portal | GCNT4 |
TCGA Data Portal | GCNT4 |
Broad Tumor Portal | GCNT4 |
OASIS Portal | GCNT4 [ Somatic mutations - Copy number] |
Somatic Mutations in Cancer : COSMIC | GCNT4 [overview] [genome browser] [tissue] [distribution] |
Somatic Mutations in Cancer : COSMIC3D | GCNT4 |
Mutations and Diseases : HGMD | GCNT4 |
LOVD (Leiden Open Variation Database) | Whole genome datasets |
LOVD (Leiden Open Variation Database) | LOVD - Leiden Open Variation Database |
LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
BioMuta | search GCNT4 |
DgiDB (Drug Gene Interaction Database) | GCNT4 |
DoCM (Curated mutations) | GCNT4 (select the gene name) |
CIViC (Clinical Interpretations of Variants in Cancer) | GCNT4 (select a term) |
intoGen | GCNT4 |
Cancer3D | GCNT4(select the gene name) |
Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
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OMIM | 616782 |
Orphanet | |
DisGeNET | GCNT4 |
Medgen | GCNT4 |
Genetic Testing Registry | GCNT4
|
NextProt | Q9P109 [Medical] |
TSGene | 51301 |
GENETests | GCNT4 |
Target Validation | GCNT4 |
Huge Navigator |
GCNT4 [HugePedia] |
snp3D : Map Gene to Disease | 51301 |
BioCentury BCIQ | GCNT4 |
ClinGen | GCNT4 |
| Clinical trials, drugs, therapy |
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Chemical/Protein Interactions : CTD | 51301 |
Chemical/Pharm GKB Gene | PA143485475 |
Clinical trial | GCNT4 |
| Miscellaneous |
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canSAR (ICR) | GCNT4 (select the gene name) |
DataMed Index | GCNT4 |
| Probes |
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| Litterature |
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PubMed | 4 Pubmed reference(s) in Entrez |
GeneRIFs | Gene References Into Functions (Entrez) |
CoreMine | GCNT4 |
EVEX | GCNT4 |
GoPubMed | GCNT4 |
iHOP | GCNT4 |